RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 FAM237AA0A1B0GTK4 181 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 A0A1W2PQH9 124 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 AP5Z1O43299 807 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 GREM1O60565 184 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 PSEN1P49768 467 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 DPYDQ12882 1025 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 C10orf120Q5SQS8 335 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 SLC36A4Q6YBV0 504 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 FRMD1Q8N878 549 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.82■■■□□ 2.04
NPHP3-202ENST00000383282 MBD1Q9UIS9 605 aaPredicted RBP27.82■■■□□ 2.04
NPHP3-202ENST00000383282 NAGPAQ9UK23 515 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 ATP6V1DQ9Y5K8 247 aa27.82■■■□□ 2.04
NPHP3-202ENST00000383282 NUP205Q92621 2012 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 TRIM24O15164 1050 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 RALAP11233 206 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 PTGER3P43115 390 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 KIF11P52732 1056 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 KRT39Q6A163 491 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 KRBA2Q6ZNG9 492 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 CHPFQ8IZ52 775 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 CCDC34Q96HJ3 373 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 CDK5RAP1Q96SZ6 601 aaKnown RBP27.81■■■□□ 2.04
NPHP3-202ENST00000383282 SCAND2PQ9GZW5 306 aaPredicted RBP27.81■■■□□ 2.04
NPHP3-202ENST00000383282 NMUR1Q9HB89 426 aa27.81■■■□□ 2.04
NPHP3-202ENST00000383282 LAMA1P25391 3075 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 CDX4O14627 284 aaPredicted RBP27.8■■■□□ 2.04
NPHP3-202ENST00000383282 MDM4O15151 490 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 GABRG2P18507 467 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 GTF2H1P32780 548 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 WASP42768 502 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 DGKGP49619 791 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 SH3PXD2AQ5TCZ1 1133 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 EGFLAMQ63HQ2 1017 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 TTC39CQ8N584 583 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 DUSP16Q9BY84 665 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 NUDT5Q9UKK9 219 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 MYH10P35580 1976 aa27.8■■■□□ 2.04
NPHP3-202ENST00000383282 RPL6Q02878 288 aaKnown RBP27.79■■■□□ 2.04
NPHP3-202ENST00000383282 UAP1L1Q3KQV9 507 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 ZNF394Q53GI3 561 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 PPP1R26Q5T8A7 1209 aaPredicted RBP27.79■■■□□ 2.04
NPHP3-202ENST00000383282 CCDC186Q7Z3E2 898 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 FAXDC2Q96IV6 333 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 CALCOCO1Q9P1Z2 691 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 ZNF510Q9Y2H8 683 aa27.79■■■□□ 2.04
NPHP3-202ENST00000383282 A0A1W2PQ27 194 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 A0A1W2PQ64 194 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 A0A1W2PQD8 194 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 ZNF217O75362 1048 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 CEACAM1P13688 526 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 CSRP1P21291 193 aaKnown RBP27.78■■■□□ 2.04
NPHP3-202ENST00000383282 HOXD12P35452 270 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 ZNF252P-AS1Q0IIN9 211 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 MIB1Q86YT6 1006 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 ZNF276Q8N554 614 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 HEXIM2Q96MH2 286 aaKnown RBP27.78■■■□□ 2.04
NPHP3-202ENST00000383282 TMEM74BQ9NUR3 256 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 HCN2Q9UL51 889 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 ZDHHC9Q9Y397 364 aa27.78■■■□□ 2.04
NPHP3-202ENST00000383282 ATXN2Q99700 1313 aaKnown RBP27.77■■■□□ 2.04
NPHP3-202ENST00000383282 GIPC1O14908 333 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 STX10O60499 249 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 MXI1P50539 228 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 EDRF1Q3B7T1 1238 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 Q6ZNB5 142 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 CEP76Q8TAP6 659 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 IPO4Q8TEX9 1081 aaKnown RBP27.77■■■□□ 2.04
NPHP3-202ENST00000383282 CLIC5Q9NZA1 410 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 USP3Q9Y6I4 520 aa27.77■■■□□ 2.04
NPHP3-202ENST00000383282 A0A1W2PQF6 199 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 PRRT4C9JH25 899 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 STC2O76061 302 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 EPB41P11171 864 aaKnown RBP27.76■■■□□ 2.03
NPHP3-202ENST00000383282 ATXN3P54252 364 aaPredicted RBP27.76■■■□□ 2.03
NPHP3-202ENST00000383282 SLC8A3P57103 927 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 COG7P83436 770 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 SLC23A3Q6PIS1 610 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 TOGARAM2Q6ZUX3 1019 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 RABEPKQ7Z6M1 372 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 SCD5Q86SK9 330 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 FBXL13Q8NEE6 735 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 BHMTQ93088 406 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 ACOX2Q99424 681 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 GABRG3Q99928 467 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 RASAL2Q9UJF2 1139 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 PILRBQ9UKJ0 227 aa27.76■■■□□ 2.03
NPHP3-202ENST00000383282 CETN3O15182 167 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 ZNF202O95125 648 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 CFIP05156 583 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 ENGP17813 658 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 ITPKAP23677 461 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 CHKAP35790 457 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 MAPK8P45983 427 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 DUOXA1Q1HG43 343 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 ZCWPW2Q504Y3 356 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 PEAR1Q5VY43 1037 aaPredicted RBP27.75■■■□□ 2.03
NPHP3-202ENST00000383282 ARHGAP18Q8N392 663 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 TMEM176AQ96HP8 235 aa27.75■■■□□ 2.03
NPHP3-202ENST00000383282 DCLK3Q9C098 648 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms