RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 IRF1P10914 325 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 COG7P83436 770 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 STIM1Q13586 685 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 SF3A2Q15428 464 aaKnown RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 PPM1JQ5JR12 505 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 C10orf120Q5SQS8 335 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 STPG1Q5TH74 334 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 ARHGAP17Q68EM7 881 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 GRAMD4Q6IC98 578 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 SDE2Q6IQ49 451 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 C12orf40Q86WS4 652 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 TMEM25Q86YD3 366 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 FMR1NBQ8N0W7 255 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 ZNF513Q8N8E2 541 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 OLIG1Q8TAK6 271 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 HEXIM2Q96MH2 286 aaKnown RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 DCLK3Q9C098 648 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 CISHQ9NSE2 258 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 ACACBO00763 2458 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 A0A1W2PQH9 124 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 SGK1O00141 431 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 CYP26A1O43174 497 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 CACNG3O60359 315 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 GREM1O60565 184 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 TBX18O95935 607 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 CHKAP35790 457 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 KDSRQ06136 332 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 C10orf76Q5T2E6 689 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 TMEM92Q6UXU6 159 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 LPCAT2Q7L5N7 544 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 GPRIN1Q7Z2K8 1008 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
RPAIN-202ENST00000381208 ELOA2Q8IYF1 753 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-202ENST00000381208 ANKRD52Q8NB46 1076 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 BBS2Q9BXC9 721 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 TPSD1Q9BZJ3 242 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 METTL14Q9HCE5 456 aaKnown RBP13.66□□□□□ -0.22
RPAIN-202ENST00000381208 DNAJC17Q9NVM6 304 aaKnown RBP13.66□□□□□ -0.22
RPAIN-202ENST00000381208 STRIP2Q9ULQ0 834 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 COQ4Q9Y3A0 265 aa13.66□□□□□ -0.22
RPAIN-202ENST00000381208 MYH10P35580 1976 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 KHNYNO15037 678 aaKnown RBP13.65□□□□□ -0.22
RPAIN-202ENST00000381208 DCLK1O15075 740 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 NPC1O15118 1278 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 TYRP14679 529 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 TBXAS1P24557 533 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-202ENST00000381208 NTSR1P30989 418 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 P2RY2P41231 377 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 PRCPP42785 496 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 PNOCQ13519 176 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 DAB2IPQ5VWQ8 1189 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 TTC30AQ86WT1 665 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 JAKMIP2Q96AA8 810 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 NMUR1Q9HB89 426 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-202ENST00000381208 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
RPAIN-202ENST00000381208 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
RPAIN-202ENST00000381208 NEDD8-MDP1E9PL57 170 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 GFRA2O00451 464 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 PSMA7O14818 248 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 TM4SF5O14894 197 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 ADAM23O75077 832 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 ZNF217O75362 1048 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 HOXD12P35452 270 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 PGFP49763 221 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 RAD23BP54727 409 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 CETN1Q12798 172 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 ZNF394Q53GI3 561 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 DCAF17Q5H9S7 520 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-202ENST00000381208 EMC10Q5UCC4 262 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 SLC36A4Q6YBV0 504 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 Q6ZNB5 142 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-202ENST00000381208 PGBD3Q8N328 593 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 SLC4A11Q8NBS3 891 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 HMGB4Q8WW32 186 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 EDEM2Q9BV94 578 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 EVLQ9UI08 416 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-202ENST00000381208 ABCA7Q8IZY2 2146 aa13.64□□□□□ -0.23
RPAIN-202ENST00000381208 MYOFQ9NZM1 2061 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms