RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZNF248Q8NDW4 579 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 FBXO22Q8NEZ5 403 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 BLOC1S5Q8TDH9 187 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 OSMRQ99650 979 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 GLIS2Q9BZE0 524 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ANKRD6Q9Y2G4 727 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PIK3CDO00329 1044 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 O00370 1275 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 RAD51BO15315 384 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 NDUFS2O75306 463 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 KATNA1O75449 491 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PCDH8O95206 1070 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 HOXB6P17509 224 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 LRRC74AQ0VAA2 488 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 FAM110CQ1W6H9 321 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 MDH1BQ5I0G3 518 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SCARA3Q6AZY7 606 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CHMP1BQ7LBR1 199 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 E2F7Q96AV8 911 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 LRRC39Q96DD0 335 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CISHQ9NSE2 258 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SETD4Q9NVD3 440 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CTNNAL1Q9UBT7 734 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 AMACRQ9UHK6 382 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 DEPDC5O75140 1603 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 MGAT4DA6NG13 374 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 URADA6NGE7 173 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 LGALS2P05162 132 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PNMA6AP0CW24 399 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 FCGR1AP12314 374 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CASP1P29466 404 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SOAT1P35610 550 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ATP5C1P36542 298 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CDK16Q00536 496 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SF3A3Q12874 501 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SEC23AQ15436 765 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PALB2Q86YC2 1186 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 LRRC43Q8N309 656 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ZNF507Q8TCN5 953 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 FAM161BQ96MY7 647 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 HINFPQ9BQA5 517 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 RRAGDQ9NQL2 400 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 KLK14Q9P0G3 267 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ACOT9Q9Y305 439 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 MAN1A2O60476 641 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PMPCBO75439 489 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ARP10275 920 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CRABP2P29373 138 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 MGAT5Q09328 741 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 DEFB128Q7Z7B8 93 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CYP39A1Q9NYL5 469 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 TBC1D14Q9P2M4 693 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PSME2Q9UL46 239 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SHOC2Q9UQ13 582 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 TNPO3Q9Y5L0 923 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 RPS6KL1Q9Y6S9 549 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 DDTLA6NHG4 134 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 GOLGA8RI6L899 631 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CATP04040 527 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 ATXN8OSP0DMR3 200 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SLC9A1P19634 815 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 HLA-DPA1P20036 260 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 HTR1BP28222 390 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SNRPD1P62314 119 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 BCL2L1Q07817 233 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 GRIK3Q13003 919 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 CELF3Q5SZQ8 465 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 PRMT9Q6P2P2 845 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 C3orf62Q6ZUJ4 267 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 NLRP14Q86W24 1093 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 MAP4K3Q8IVH8 894 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 HJURPQ8NCD3 748 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 AHCYL2Q96HN2 611 aaKnown RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 NMRAL1Q9HBL8 299 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 NCKIPSDQ9NZQ3 722 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 UBA2Q9UBT2 640 aaPredicted RBP7.38□□□□□ -1.23
CCDC171-201ENST00000380701 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
CCDC171-201ENST00000380701 C15orf38-AP3S2A0A0A6YYH1 394 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 CCDC195A0A1B0GUA6 201 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 PGM1P36871 562 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 CLK3P49761 638 aaKnown RBP7.37□□□□□ -1.23
CCDC171-201ENST00000380701 CRYBB1P53674 252 aaPredicted RBP7.37□□□□□ -1.23
CCDC171-201ENST00000380701 KIF1AQ12756 1690 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 HECTD3Q5T447 861 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 ERMARDQ5T6L9 678 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 C11orf88Q6PI97 169 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 FOXR2Q6PJQ5 311 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 RGS9BPQ6ZS82 235 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 ARPINQ7Z6K5 226 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 CLEC10AQ8IUN9 316 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 P3H2Q8IVL5 708 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 CYP4Z2PQ8N1L4 340 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC171-201ENST00000380701 ELOVL6Q9H5J4 265 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 C2CD2Q9Y426 696 aa7.37□□□□□ -1.23
CCDC171-201ENST00000380701 EPB42P16452 691 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms