RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 GTF2IRD1Q9UHL9 959 aa13.11□□□□□ -0.31
VPS16-202ENST00000380445 PTGESO14684 152 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 NPR3P17342 541 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 SSTR1P30872 391 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 GJA9P57773 515 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 MPP2Q14168 576 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 KCNJ11Q14654 390 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 CA9Q16790 459 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 SLC25A52Q3SY17 297 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 N4BP2L2Q92802 583 aaPredicted RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 CYTH2Q99418 400 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 RCOR3Q9P2K3 495 aaPredicted RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 CDY2AQ9Y6F7 541 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 GHRP10912 638 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 RBL1P28749 1068 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 ARL4AP40617 200 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 MSH2P43246 934 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 ADGRD1Q6QNK2 874 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 TAB3Q8N5C8 712 aaPredicted RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 GDAP1Q8TB36 358 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 FBF1Q8TES7 1133 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 CCT6BQ92526 530 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
VPS16-202ENST00000380445 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 STAP1Q9ULZ2 295 aa13.1□□□□□ -0.31
VPS16-202ENST00000380445 CCT8L1PA6NM43 557 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 GABRDO14764 452 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SNX3O60493 162 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 BANF1O75531 89 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SUN1O94901 812 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 THP07101 528 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 LHX1P48742 406 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 GAD2Q05329 585 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SPARCL1Q14515 664 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 FUKQ8N0W3 1084 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 TRPM7Q96QT4 1865 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 DAB1O75553 588 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 NOS2P35228 1153 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 YWHAZP63104 245 aaKnown RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 MRPS5P82675 430 aaKnown RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SLC45A4Q5BKX6 768 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 OSTM1Q86WC4 334 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SIX6OS1Q8N1H7 587 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 ALKBH8Q96BT7 664 aaKnown RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 ST3GAL5Q9UNP4 418 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 IKBKGQ9Y6K9 419 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 CHUKO15111 745 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 GPR182O15218 404 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SLC10A3P09131 477 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 TFE3P19532 575 aaPredicted RBP13.09□□□□□ -0.31
VPS16-202ENST00000380445 PAX7P23759 505 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 ELK3P41970 407 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 MAGEA6P43360 314 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SULT1E1P49888 294 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 DEFB106AQ8N104 65 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 LRRC39Q96DD0 335 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 DHRS4Q9BTZ2 278 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 SLC24A3Q9HC58 644 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 ETNK2Q9NVF9 386 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 FGFR1OP2Q9NVK5 253 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 GIT1Q9Y2X7 761 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
VPS16-202ENST00000380445 HACD1B0YJ81 288 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 GCATO75600 419 aa13.08□□□□□ -0.32
VPS16-202ENST00000380445 FBXO21O94952 628 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms