RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 USP6NLQ92738 828 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 APPL1Q9UKG1 709 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 FAM50BQ9Y247 325 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TCRBV7S3A2A0A539 114 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 APOEP02649 317 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 KLRC2P26717 231 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM132DQ14C87 1099 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TBCCQ15814 346 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TTC7BQ86TV6 843 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 ACSS3Q9H6R3 686 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 C20orf96Q9NUD7 363 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 SMAPO00193 183 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PROCP04070 461 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 KIF19Q2TAC6 998 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TRMT5Q32P41 509 aaKnown RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 EFCAB12Q6NXP0 572 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 NIPA1Q7RTP0 329 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ELMOD1Q8N336 334 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 FRMD8P1Q9BZ68 369 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 FAM96AQ9H5X1 160 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM191CA6NGB0 347 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 C6orf222P0C671 652 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 GSTT1P30711 240 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 RNF148Q8N7C7 305 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF280CQ8ND82 737 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 CYP1A1P04798 512 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 INHBEP58166 350 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PEX6Q13608 980 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 FLOT2Q14254 428 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ZACNQ401N2 412 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 IL31Q6EBC2 164 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PLEKHA7Q6IQ23 1121 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 YAF2Q8IY57 180 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ETAA1Q9NY74 926 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 COL4A1P02462 1669 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 VWA5AO00534 786 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 OGTO15294 1046 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 C4BPAP04003 597 aaKnown RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ABCG1P45844 678 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 GLRBP48167 497 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 CLCN3P51790 818 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PDCD2Q16342 344 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-202ENST00000379826 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 LRRC8EQ6NSJ5 796 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 ULK2Q8IYT8 1036 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TRAPPC12Q8WVT3 735 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 MYPNQ86TC9 1320 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 APOC4-APOC2K7ER74 178 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 CYB561D2O14569 222 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TPP1O14773 563 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 APOC2P02655 101 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 STX1BP61266 288 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 SP3Q02447 781 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 IYDQ6PHW0 289 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 KCNK4Q9NYG8 393 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
SMAD9-202ENST00000379826 PRR5-ARHGAP8B1AHC4 643 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 AHCYL1O43865 530 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 CYP2F1P24903 491 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 HSD17B4P51659 736 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ARHGAP8P85298 464 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 LAMTOR4Q0VGL1 99 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 NET1Q7Z628 596 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 MAB21L3Q8N8X9 362 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 TFB1MQ8WVM0 346 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ECSITQ9BQ95 431 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 DEFB129Q9H1M3 183 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 SLC4A1P02730 911 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 LY6KQ17RY6 165 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ZC3H12AQ5D1E8 599 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ANO7Q6IWH7 933 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 LAYNQ6UX15 382 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 MFN1Q8IWA4 741 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 EXOC8Q8IYI6 725 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 PDZD8Q8NEN9 1154 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 KCNK16Q96T55 309 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ACSS2Q9NR19 701 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms