RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.15
RAB3IP-204ENST00000378815 TPX2Q9ULW0 747 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-204ENST00000378815 NAALADL1Q9UQQ1 740 aa16.02■□□□□ 0.15
RAB3IP-204ENST00000378815 SHBGP04278 402 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 CYP2F1P24903 491 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 RDXP35241 583 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 KCTD16Q68DU8 428 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 PM20D1Q6GTS8 502 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 RELL1Q8IUW5 271 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 CRIPAKQ8N1N5 446 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 SCML4Q8N228 414 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 FAM193BQ96PV7 902 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 MAGEB5Q9BZ81 275 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 CDC42EP4Q9H3Q1 356 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 PSD3Q9NYI0 1048 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 HMGB1P1B2RPK0 211 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 M0QYT0 321 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 BCAR1P56945 870 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 IFFO1Q0D2I5 559 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 MORF4L2Q15014 288 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 RNASEH2BQ5TBB1 312 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 ANKRD33Q7Z3H0 272 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 IRGQQ8WZA9 623 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 PWWP2AQ96N64 755 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 CSPG4P5Q96PW8 444 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 BEGAINQ9BUH8 593 aa16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
RAB3IP-204ENST00000378815 NDC80O14777 642 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 TRAPPC3O43617 180 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 LTFP02788 710 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 STIP1P31948 543 aaKnown RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 ROR1Q01973 937 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 ABI1Q8IZP0 508 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 FAM71DQ8N9W8 422 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 LRRC4CQ9HCJ2 640 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 USP3Q9Y6I4 520 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 CAPN9O14815 690 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 RPL22P35268 128 aaKnown RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 DEUP1Q05D60 604 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 ZC3H18Q86VM9 953 aaKnown RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 SLC9A7Q96T83 725 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 ZCWPW1Q9H0M4 648 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 PIGVQ9NUD9 493 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 RCOR3Q9P2K3 495 aaPredicted RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
RAB3IP-204ENST00000378815 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
RAB3IP-204ENST00000378815 ZFXP17010 805 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 NME3Q13232 169 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 KRT71Q3SY84 523 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 DARS2Q6PI48 645 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 SPATA2LQ8IUW3 424 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 PYROXD2Q8N2H3 581 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 SLC7A14Q8TBB6 771 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 PGAP3Q96FM1 320 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 TMEM109Q9BVC6 243 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 DNAJC17Q9NVM6 304 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 RRN3Q9NYV6 651 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 SYN3O14994 580 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 TADA2AO75478 443 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 TTC4O95801 387 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 CXCL10P02778 98 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 NCAM1P13591 858 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 GATMP50440 423 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 AGBL2Q5U5Z8 902 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 EMC10Q5UCC4 262 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 SLC39A5Q6ZMH5 540 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 CEP128Q6ZU80 1094 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 PRCCQ92733 491 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 HIPK3Q9H422 1215 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 USP29Q9HBJ7 922 aa15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 WDR6Q9NNW5 1121 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 COL4A4P53420 1690 aaPredicted RBP15.99■□□□□ 0.15
RAB3IP-204ENST00000378815 SYNJ2BP-COX16A0A087WUM0 186 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 H7C0C1 242 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 OR4Q2P0C623 313 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 ATP5OP48047 213 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 NR2C2P49116 596 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 CTCFP49711 727 aaPredicted RBP15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 SLC39A12Q504Y0 691 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 HOOK3Q86VS8 718 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 NTAN1Q96AB6 310 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 RTP4Q96DX8 246 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 SCLYQ96I15 445 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 RBM15Q96T37 977 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 CENPHQ9H3R5 247 aa15.98■□□□□ 0.15
RAB3IP-204ENST00000378815 COX16Q9P0S2 106 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms