RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ZNF487B1APH4 448 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 GALTP07902 379 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 ITGA8P53708 1063 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 SLC9A4Q6AI14 798 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 SCAMP5Q8TAC9 235 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 TMPRSS4Q9NRS4 437 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 PIGVQ9NUD9 493 aa18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 MTRF1LQ9UGC7 380 aaKnown RBP18.07■□□□□ 0.48
THUMPD2-201ENST00000378727 SYNJ2BP-COX16A0A087WUM0 186 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 NT5C1B-RDH14C9J2C7 533 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 CAPN9O14815 690 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 POLR3GO15318 223 aaPredicted RBP18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 FGFR3P22607 806 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 RDXP35241 583 aaKnown RBP18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 GJA8P48165 433 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 GDF10P55107 478 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 NME3Q13232 169 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 PYROXD2Q8N2H3 581 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 ADAM32Q8TC27 787 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 IRGQQ8WZA9 623 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 EPB41L4BQ9H329 900 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 AAASQ9NRG9 546 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 TMEM39AQ9NV64 488 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 COX16Q9P0S2 106 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 PLAAQ9Y263 795 aa18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 ZNF638Q14966 1978 aaKnown RBP18.06■□□□□ 0.48
THUMPD2-201ENST00000378727 H0YGN5 161 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 SGK1O00141 431 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 TNFRSF10BO14763 440 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 NCAM1P13591 858 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 EIF3EP60228 445 aaKnown RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 P3H1Q32P28 736 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 FUT10Q6P4F1 479 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 DCP1BQ8IZD4 617 aaKnown RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 DNAJC5GQ8N7S2 189 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 SLC7A14Q8TBB6 771 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 UBLCP1Q8WVY7 318 aaPredicted RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 EDEM1Q92611 657 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 TMEM175Q9BSA9 504 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 ADAM7Q9H2U9 754 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 ABI2Q9NYB9 513 aaPredicted RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 NFS1Q9Y697 457 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 COL4A6Q14031 1691 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 APOL1O14791 398 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 UPP2O95045 317 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 GRIK1P39086 918 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 DEUP1Q05D60 604 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 LRRC26Q2I0M4 334 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 CTXN3Q4LDR2 81 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 C1orf228Q6PIY5 440 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 P3H4Q92791 437 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 PCDH9Q9HC56 1237 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 WDR6Q9NNW5 1121 aaKnown RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 CWC15Q9P013 229 aaKnown RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 ANAPC5Q9UJX4 755 aa18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 MKI67P46013 3256 aaKnown RBP18.05■□□□□ 0.48
THUMPD2-201ENST00000378727 CLTBP09497 229 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 RBP3P10745 1247 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 CHKAP35790 457 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 SLC5A3P53794 718 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 PMS2P54278 862 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 IKBKEQ14164 716 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 IZUMO3Q5VZ72 239 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 CNKSR3Q6P9H4 555 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 B4GALNT4Q76KP1 1039 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 PSTKQ8IV42 348 aaKnown RBP18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 UNC45BQ8IWX7 931 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 LRRC43Q8N309 656 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 CCHCR1Q8TD31 782 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 PGAP3Q96FM1 320 aaPredicted RBP18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 PAWRQ96IZ0 340 aaKnown RBP18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 CSPG4P5Q96PW8 444 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 ANLNQ9NQW6 1124 aa18.04■□□□□ 0.48
THUMPD2-201ENST00000378727 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.484e-6■■■■■ 80.4
THUMPD2-201ENST00000378727 I6L893 689 aaPredicted RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 MCF2LO15068 1137 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 RNF40O75150 1001 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 IFNB1P01574 187 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 AMHP03971 560 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 HSPA8P11142 646 aaKnown RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 TGM2P21980 687 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 ITGB8P26012 769 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 GPS1Q13098 491 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 NFE2Q16621 373 aaPredicted RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 SPDYCQ5MJ68 293 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 RTP2Q5QGT7 225 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 UBAP2Q5T6F2 1119 aaKnown RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 HIBCHQ6NVY1 386 aaPredicted RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 ZC3H18Q86VM9 953 aaKnown RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 OR2W6PQ8NHA6 318 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 FUBP3Q96I24 572 aaKnown RBP eCLIP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms