RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 ANKS3Q6ZW76 656 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 ANKRD52Q8NB46 1076 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 COLGALT1Q8NBJ5 622 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 NAT9Q9BTE0 207 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 BRD8Q9H0E9 1235 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 LRRC40Q9H9A6 602 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 SLC39A10Q9ULF5 831 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 GRID1Q9ULK0 1009 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 NHSL1Q5SYE7 1610 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 RAMP2O60895 175 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 MYL2P10916 166 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 PRKCZQ05513 592 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 TOP6BLQ8N6T0 577 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 KLF6Q99612 283 aaPredicted RBP21.9■■□□□ 1.1
SKI-201ENST00000378536 WWP1Q9H0M0 922 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 HIPK3Q9H422 1215 aa21.9■■□□□ 1.1
SKI-201ENST00000378536 MYO1DO94832 1006 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 LBRQ14739 615 aaKnown RBP21.89■■□□□ 1.1
SKI-201ENST00000378536 MFN1Q8IWA4 741 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 N4BP2L2Q92802 583 aaPredicted RBP21.89■■□□□ 1.1
SKI-201ENST00000378536 SMPD4Q9NXE4 827 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 RARGP13631 454 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 AMPD1P23109 780 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 STX3Q13277 289 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 HIBCHQ6NVY1 386 aaPredicted RBP21.89■■□□□ 1.1
SKI-201ENST00000378536 FAM183BPQ6ZVS7 135 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 KATNAL2Q8IYT4 538 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 LZTR1Q8N653 840 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 PCDHGC5Q9Y5F6 944 aa21.89■■□□□ 1.1
SKI-201ENST00000378536 ZWINTO95229 277 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 SATB1Q01826 763 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 C9orf57Q5W0N0 161 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 MRNIPQ6NTE8 343 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 FICDQ9BVA6 458 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 TKTL2Q9H0I9 626 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 UPF3AQ9H1J1 476 aaKnown RBP21.89■■□□□ 1.09
SKI-201ENST00000378536 NR2E3Q9Y5X4 410 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 CCDC22O60826 627 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 CHRM3P20309 590 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 TFAP2DQ7Z6R9 452 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 WNT8BQ93098 351 aa21.89■■□□□ 1.09
SKI-201ENST00000378536 SELPP16109 830 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 TRIM15Q9C019 465 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 RHOBTB1O94844 696 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 OR1E1P30953 314 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ZNF135P52742 658 aaPredicted RBP21.88■■□□□ 1.09
SKI-201ENST00000378536 MARC1Q5VT66 337 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 LRRC6Q86X45 466 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 PDZD7Q9H5P4 517 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 SLC4A7Q9Y6M7 1214 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 M0R2N6 131 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 CREMQ03060 361 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 MYLPFQ96A32 169 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 VCX3AQ9NNX9 186 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 RBM22Q9NW64 420 aaKnown RBP eCLIP21.88■■□□□ 1.099e-7■■□□□ 11.7
SKI-201ENST00000378536 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
SKI-201ENST00000378536 TMEM120BA0PK00 339 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 TSPAN1O60635 241 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ENDOD1O94919 500 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ANP32DO95626 131 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 NUMBP49757 651 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ANKRD20A4Q4UJ75 823 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ANKRD20A8PQ5CZ79 823 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ANKRD20A2Q5SQ80 823 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ANKRD20A1Q5TYW2 823 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 PHF13Q86YI8 300 aaPredicted RBP21.88■■□□□ 1.09
SKI-201ENST00000378536 SIAH1Q8IUQ4 282 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 KIRREL3Q8IZU9 778 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 FBXO25Q8TCJ0 367 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 L3MBTL1Q9Y468 752 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 RPTORQ8N122 1335 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 E2F8A0AVK6 867 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 PRMT2P55345 433 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ZNF467Q7Z7K2 595 aaPredicted RBP21.88■■□□□ 1.09
SKI-201ENST00000378536 TBC1D13Q9NVG8 400 aa21.88■■□□□ 1.09
SKI-201ENST00000378536 ADAMTS3O15072 1205 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 PIGZQ86VD9 579 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 TRIM49D1C9J1S8 452 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 CLNS1AP54105 237 aaKnown RBP21.87■■□□□ 1.09
SKI-201ENST00000378536 IL1RL1Q01638 556 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 MBTD1Q05BQ5 628 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 USP41Q3LFD5 358 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 TRIM68Q6AZZ1 485 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 PALB2Q86YC2 1186 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 IRF2BP1Q8IU81 584 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 ZNF143P52747 638 aaPredicted RBP21.87■■□□□ 1.09
SKI-201ENST00000378536 SPATA21Q7Z572 469 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 TSPAN3O60637 253 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 RARAP10276 462 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.095e-7■■■□□ 16.1
SKI-201ENST00000378536 PABPC1LQ4VXU2 614 aaKnown RBP21.87■■□□□ 1.09
SKI-201ENST00000378536 FIBCD1Q8N539 461 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 HTR3CQ8WXA8 447 aa21.87■■□□□ 1.09
SKI-201ENST00000378536 HMOX2P30519 316 aa21.86■■□□□ 1.09
SKI-201ENST00000378536 TUSC3Q13454 348 aa21.86■■□□□ 1.09
SKI-201ENST00000378536 AARS2Q5JTZ9 985 aaKnown RBP21.86■■□□□ 1.09
SKI-201ENST00000378536 CD274Q9NZQ7 290 aa21.86■■□□□ 1.09
SKI-201ENST00000378536 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.86■■□□□ 1.09
SKI-201ENST00000378536 DRG1Q9Y295 367 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms