RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 SLC12A8A0AV02 714 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 O00370 1275 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 PSMD3O43242 534 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 HNRNPH1P31943 449 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 CRADDP78560 199 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 PTPN20Q4JDL3 420 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 CYB5D1Q6P9G0 228 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 DPYSL4O14531 572 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 ABCG1P45844 678 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 DPYSL3Q14195 570 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 ZC3H12AQ5D1E8 599 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 MTDHQ86UE4 582 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 PHF13Q86YI8 300 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 LPPQ93052 612 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 NCLNQ969V3 563 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 B3GNT5Q9BYG0 378 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 LRRC19Q9H756 370 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 RNF103-CHMP3A0A140T963 221 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 RNF103O00237 685 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 FSCN2O14926 492 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 LCA5LO95447 670 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 MMP8P22894 467 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 KBTBD12Q3ZCT8 623 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 LAYNQ6UX15 382 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 IQCKQ8N0W5 287 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ZBTB18Q99592 522 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 SNRNP25Q9BV90 132 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 OSBPL1AQ9BXW6 950 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ANLNQ9NQW6 1124 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 OPLAHO14841 1288 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 LIASO43766 372 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 FBXO21O94952 628 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ADRA1DP25100 572 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 PDCD2Q16342 344 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 HSP90AA5PQ58FG0 334 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 NT5MQ9NPB1 228 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 MGAT1P26572 445 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 RPL22P35268 128 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 CSE1LP55060 971 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 CPNE8Q86YQ8 564 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
NPHP4-203ENST00000378169 LRRC57Q8N9N7 239 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 SHCBP1Q8NEM2 672 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
NPHP4-203ENST00000378169 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 PRRC2BQ5JSZ5 2229 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 WDR27A2RRH5 827 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CHRM3P20309 590 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 DNAJB2P25686 324 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 AQP5P55064 265 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 JAM2P57087 298 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 MPP3Q13368 585 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 LINC00523Q86TU6 105 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 C18orf25Q96B23 403 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CD248Q9HCU0 757 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 ONECUT3O60422 494 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 C4BPAP04003 597 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 ZNF143P52747 638 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 NFE2Q16621 373 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 PPP1R26Q5T8A7 1209 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 LRRC8EQ6NSJ5 796 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 ATP6V0D2Q8N8Y2 350 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 STKLD1Q8NE28 680 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CALML6Q8TD86 181 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 USP6NLQ92738 828 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 VANGL2Q9ULK5 521 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 GPR25O00155 361 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CLDN5O00501 218 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 SPTLC1O15269 473 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms