RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MCF2LO15068 1137 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 B4GALT5O43286 388 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 MED7O43513 233 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 MAGEA8P43361 318 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 DNAL1Q4LDG9 190 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 SH3PXD2AQ5TCZ1 1133 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 DNAJC14Q6Y2X3 702 aaPredicted RBP17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 RASSF3Q86WH2 238 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 SDCBP2Q9H190 292 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 ATXN10Q9UBB4 475 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 HMGXB4Q9UGU5 601 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 AVILO75366 819 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 IL1BP01584 269 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 EEF1DP3Q658K8 133 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 DARS2Q6PI48 645 aaKnown RBP17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 PRPF39Q86UA1 669 aaKnown RBP17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 IQCGQ9H095 443 aaKnown RBP17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
PCDHA1-201ENST00000378133 TCRBV9S1A1TA0A576 114 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 I3L4J1 428 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 TRUB2O95900 331 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 CXCL8P10145 99 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 SLC18A2Q05940 514 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 PABPC1LQ4VXU2 614 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 RAB6CQ53S08 254 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 TMCO4Q5TGY1 634 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 RAB6CQ9H0N0 254 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 FZD9O00144 591 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 PIK3R2O00459 728 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 INHBAP08476 426 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 LRRC36Q1X8D7 754 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 HSF5Q4G112 596 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 MPZL3Q6UWV2 235 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 ACAD11Q709F0 780 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 SMYD3Q9H7B4 428 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 SIX4Q9UIU6 781 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 PHF24Q9UPV7 400 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.35
PCDHA1-201ENST00000378133 SOWAHBA6NEL2 793 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 KLF11O14901 512 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ZSCAN9O15535 394 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 BUD23O43709 281 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 B4GALT4O60513 344 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 FKBP6O75344 327 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 MED21Q13503 144 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 SH2D5Q6ZV89 423 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 NME8Q8N427 588 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 SLC4A11Q8NBS3 891 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 STKLD1Q8NE28 680 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 OR6Y1Q8NGX8 325 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PEBP4Q96S96 227 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 MIS12Q9H081 205 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 TMEM165Q9HC07 324 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 MGAMO43451 1857 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 COPEO14579 308 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 MICAL2O94851 1124 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PABPC4LP0CB38 370 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 KITP10721 976 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 CDH6P55285 790 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 HNRNPDQ14103 355 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 HSDL1Q3SXM5 330 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 UBA3Q8TBC4 463 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 NAT14Q8WUY8 206 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 KLRG1Q96E93 195 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 WWP1Q9H0M0 922 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 BLOC1S6Q9UL45 172 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 IMPDH2P12268 514 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PROZP22891 400 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ALDH18A1P54886 795 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 TMPRSS15P98073 1019 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 ROR1Q01973 937 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PTPN11Q06124 597 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 FAM102AQ5T9C2 384 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
PCDHA1-201ENST00000378133 PDSS2Q86YH6 399 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms