RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 CENPIQ92674 756 aaPredicted RBP11.25□□□□□ -0.61
SEC23B-203ENST00000377465 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
SEC23B-203ENST00000377465 ACBD6Q9BR61 282 aa11.25□□□□□ -0.61
SEC23B-203ENST00000377465 NKX1-2Q9UD57 310 aaPredicted RBP11.25□□□□□ -0.61
SEC23B-203ENST00000377465 ZMYND8Q9ULU4 1186 aaPredicted RBP11.25□□□□□ -0.61
SEC23B-203ENST00000377465 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 RAD51CO43502 376 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 RRM1P23921 792 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 C1QTNF8P60827 252 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 CLLU1OSQ5K130 101 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 LONP2Q86WA8 852 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 NAP1L3Q99457 506 aaPredicted RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 ADAM2Q99965 735 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 SMAPO00193 183 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 ENDOD1O94919 500 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 MLH1P40692 756 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 RAP1GAPP47736 663 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 BCAT1P54687 386 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 BNIP1Q12981 228 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 NPAS4Q8IUM7 802 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 LRRC34Q8IZ02 419 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 SH3TC2Q8TF17 1288 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 ENPP3O14638 875 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 SYN3O14994 580 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 ZNF189O75820 626 aaPredicted RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 OAZ2O95190 189 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 KRT19P08727 400 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 CALB2P22676 271 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 MARCKSL1P49006 195 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 BST2Q10589 180 aaKnown RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 OSTM1Q86WC4 334 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 ADGRF2Q8IZF7 708 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 CASD1Q96PB1 797 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 FRMD8P1Q9BZ68 369 aaPredicted RBP11.24□□□□□ -0.61
SEC23B-203ENST00000377465 SLITRK6Q9H5Y7 841 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 COMMD8Q9NX08 183 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 CTNNAL1Q9UBT7 734 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 PARP2Q9UGN5 583 aa11.24□□□□□ -0.61
SEC23B-203ENST00000377465 MYO16Q9Y6X6 1858 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 FSCN2O14926 492 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 SPOPO43791 374 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 TBC1D4O60343 1298 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 EFCAB14O75071 495 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 ZNF24P17028 368 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 CD58P19256 250 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 GSTT1P30711 240 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 SIX1Q15475 284 aaPredicted RBP11.23□□□□□ -0.61
SEC23B-203ENST00000377465 IRGCQ6NXR0 463 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 OLFML1Q6UWY5 402 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 ASRGL1Q7L266 308 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 TMEM130Q8N3G9 435 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 GBP7Q8N8V2 638 aaPredicted RBP11.23□□□□□ -0.61
SEC23B-203ENST00000377465 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 SEPT8Q92599 483 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 VCX3BQ9H321 246 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 HSFX1Q9UBD0 423 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 SCOCQ9UIL1 159 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 NR2E1Q9Y466 385 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 PTPN9P43378 593 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 ARSEP51690 589 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 CDH8P55286 799 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
SEC23B-203ENST00000377465 TSNAXIP1Q2TAA8 658 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 SCARA5Q6ZMJ2 495 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 PAQR9Q6ZVX9 377 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 EXD1Q8NHP7 514 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.611e-7■□□□□ 9.7
SEC23B-203ENST00000377465 MRPL9Q9BYD2 267 aaKnown RBP11.23□□□□□ -0.61
SEC23B-203ENST00000377465 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
SEC23B-203ENST00000377465 PGRMC1O00264 195 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 ODC1P11926 461 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 COMTP21964 271 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 GNL1P36915 607 aaPredicted RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 SLC26A9Q7LBE3 791 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 C3orf58Q8NDZ4 430 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 IRGQQ8WZA9 623 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 ZNF689Q96CS4 500 aaPredicted RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 PGAP3Q96FM1 320 aaPredicted RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 GAD1Q99259 594 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 DDX56Q9NY93 547 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 HUS1O60921 280 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 CHN1P15882 459 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 ECHS1P30084 290 aa11.22□□□□□ -0.61
SEC23B-203ENST00000377465 SLC25A11Q02978 314 aaKnown RBP11.22□□□□□ -0.61
SEC23B-203ENST00000377465 SMARCB1Q12824 385 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms