RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ESRRAP11474 423 aaPredicted RBP26.24■■□□□ 1.79
C9orf40-201ENST00000376854 INSRRP14616 1297 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 KCTD2Q14681 263 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 TTC39CQ8N584 583 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 USP6NLQ92738 828 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 TBCBQ99426 244 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 SLC13A1Q9BZW2 595 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 AKT3Q9Y243 479 aa26.24■■□□□ 1.79
C9orf40-201ENST00000376854 UGT1A9O60656 530 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 RFPL1O75677 317 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 MRPS5P82675 430 aaKnown RBP26.23■■□□□ 1.79
C9orf40-201ENST00000376854 BMPR2Q13873 1038 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 PPP6R3Q5H9R7 873 aaPredicted RBP26.23■■□□□ 1.79
C9orf40-201ENST00000376854 PPP1R26Q5T8A7 1209 aaPredicted RBP26.23■■□□□ 1.79
C9orf40-201ENST00000376854 UNC5AQ6ZN44 842 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 TRIM42Q8IWZ5 723 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 VPS52Q8N1B4 723 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.23■■□□□ 1.79
C9orf40-201ENST00000376854 ARMC2Q8NEN0 867 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 MCUR1Q96AQ8 359 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 FAM167BQ9BTA0 163 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 UGT1A7Q9HAW7 530 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 UGT1A10Q9HAW8 530 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 UGT1A8Q9HAW9 530 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 PAX7P23759 505 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 ABL2P42684 1182 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 BLMHQ13867 455 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 APBB1IPQ7Z5R6 666 aaPredicted RBP26.23■■□□□ 1.79
C9orf40-201ENST00000376854 LRRC39Q96DD0 335 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 ZNF670Q9BS34 389 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 C2CD2Q9Y426 696 aa26.23■■□□□ 1.79
C9orf40-201ENST00000376854 LIN7AO14910 233 aaPredicted RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 VTNP04004 478 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 CCNFP41002 786 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 TMPRSS15P98073 1019 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 SLC6A3Q01959 620 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 STILQ15468 1287 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 KYAT1Q16773 422 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 ZNF484Q5JVG2 852 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 SCUBE3Q8IX30 993 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 MCUQ8NE86 351 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 APBB2Q92870 758 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 NMUR2Q9GZQ4 415 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 TAS2R1Q9NYW7 299 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 MAD1L1Q9Y6D9 718 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 EVPLQ92817 2033 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 KRT38O76015 456 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 STAU1O95793 577 aaKnown RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 CSH1P0DML2 217 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 CSH2P0DML3 217 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 BST1Q10588 318 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 TTLL12Q14166 644 aaPredicted RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 ATG16L1Q676U5 607 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 ALYREFQ86V81 257 aaKnown RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 TTC30AQ86WT1 665 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 IFNLR1Q8IU57 520 aaPredicted RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 CDKL3Q8IVW4 592 aaPredicted RBP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 KHSRPQ92945 711 aaKnown RBP eCLIP26.22■■□□□ 1.79
C9orf40-201ENST00000376854 E2F7Q96AV8 911 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 C7orf26Q96N11 449 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 ACAP3Q96P50 834 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 KCNK4Q9NYG8 393 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 ARMCX1Q9P291 453 aa26.22■■□□□ 1.79
C9orf40-201ENST00000376854 SPDYE5A6NIY4 337 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 MDM4O15151 490 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 SMNDC1O75940 238 aaKnown RBP eCLIP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 GSTA2P09210 222 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 DESP17661 470 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 TTLL4Q14679 1199 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 MICAL1Q8TDZ2 1067 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 KIF12Q96FN5 646 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 TRIM56Q9BRZ2 755 aaKnown RBP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 FAM124BQ9H5Z6 455 aaPredicted RBP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 NRDE2Q9H7Z3 1164 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 DICER1Q9UPY3 1922 aaKnown RBP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 CXCL11O14625 94 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 CYP2F1P24903 491 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 KPNB1Q14974 876 aaKnown RBP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 TEX9Q8N6V9 391 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 TRIM6Q9C030 488 aaPredicted RBP26.21■■□□□ 1.79
C9orf40-201ENST00000376854 FAM49BQ9NUQ9 324 aa26.21■■□□□ 1.79
C9orf40-201ENST00000376854 CCDC195A0A1B0GUA6 201 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 METTL18O95568 372 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 ATP6V1C1P21283 382 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 MAGEA3P43357 314 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 HDAC4P56524 1084 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 CHI3L2Q15782 390 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 PKDCCQ504Y2 493 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 FAM91A1Q658Y4 838 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 TRMT10BQ6PF06 316 aaKnown RBP26.2■■□□□ 1.79
C9orf40-201ENST00000376854 C4orf22Q6V702 233 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 ACOT1Q86TX2 421 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 MTBPQ96DY7 904 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 SLC4A5Q9BY07 1137 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 MKS1Q9NXB0 559 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 STOML1Q9UBI4 398 aa26.2■■□□□ 1.79
C9orf40-201ENST00000376854 RARBP10826 455 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 ZNF534Q76KX8 674 aa26.2■■□□□ 1.78
C9orf40-201ENST00000376854 TMEM110Q86TL2 294 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms