RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 STARD13Q9Y3M8 1113 aa19.48■□□□□ 0.71
HDAC6-202ENST00000376610 CACNG3O60359 315 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 TRIM49P0CI25 452 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 TRIM49CP0CI26 452 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 RALAP11233 206 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 HOXD12P35452 270 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 PTGER3P43115 390 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 PGFP49763 221 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 RPL6Q02878 288 aaKnown RBP19.47■□□□□ 0.71
HDAC6-202ENST00000376610 ZNF252P-AS1Q0IIN9 211 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 ADAM9Q13443 819 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 C1orf220Q5T0J3 134 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 GPRIN1Q7Z2K8 1008 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 TWNKQ96RR1 684 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDAC6-202ENST00000376610 MBD1Q9UIS9 605 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-202ENST00000376610 MAPK8IP1Q9UQF2 711 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
HDAC6-202ENST00000376610 ASCC3Q8N3C0 2202 aaKnown RBP19.46■□□□□ 0.71
HDAC6-202ENST00000376610 A0A1W2PQH9 124 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 CILPO75339 1184 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 ZNF217O75362 1048 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 CEACAM1P13688 526 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 CSRP1P21291 193 aaKnown RBP19.46■□□□□ 0.71
HDAC6-202ENST00000376610 WASP42768 502 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 DGKGP49619 791 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 NDUFA8P51970 172 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 ATXN3P54252 364 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-202ENST00000376610 RABEPKQ7Z6M1 372 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
HDAC6-202ENST00000376610 FRMD1Q8N878 549 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 CEP76Q8TAP6 659 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 TMEM8AQ9HCN3 771 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 OSER1Q9NX31 292 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 ZNF510Q9Y2H8 683 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 CEP192Q8TEP8 1941 aa19.46■□□□□ 0.71
HDAC6-202ENST00000376610 TNRC6BQ9UPQ9 1833 aaKnown RBP19.46■□□□□ 0.71
HDAC6-202ENST00000376610 HHLA1C9JL84 531 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 CDX4O14627 284 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-202ENST00000376610 TRIM24O15164 1050 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 GREM1O60565 184 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 CFIP05156 583 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 PRR29P0C7W0 189 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 GABRG2P18507 467 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 GTF2H1P32780 548 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 MAPK8P45983 427 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 KIF11P52732 1056 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 SLC8A3P57103 927 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 PPP3CAQ08209 521 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 DPYDQ12882 1025 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 EGFLAMQ63HQ2 1017 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 KRT39Q6A163 491 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 CCDC186Q7Z3E2 898 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 HEXIM2Q96MH2 286 aaKnown RBP19.45■□□□□ 0.7
HDAC6-202ENST00000376610 DUSP16Q9BY84 665 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 SCAND2PQ9GZW5 306 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-202ENST00000376610 SLC32A1Q9H598 525 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 NMUR1Q9HB89 426 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 APOBEC3GQ9HC16 384 aaKnown RBP19.45■□□□□ 0.7
HDAC6-202ENST00000376610 CALCOCO1Q9P1Z2 691 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 NUDT5Q9UKK9 219 aa19.45■□□□□ 0.7
HDAC6-202ENST00000376610 GIPC1O14908 333 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 MDM4O15151 490 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 STX10O60499 249 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 ITPKAP23677 461 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 COG7P83436 770 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 SLC23A3Q6PIS1 610 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 KRBA2Q6ZNG9 492 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 MIB1Q86YT6 1006 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 IPO4Q8TEX9 1081 aaKnown RBP19.44■□□□□ 0.7
HDAC6-202ENST00000376610 TMEM74BQ9NUR3 256 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 CLIC5Q9NZA1 410 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 PILRBQ9UKJ0 227 aa19.44■□□□□ 0.7
HDAC6-202ENST00000376610 ATXN2Q99700 1313 aaKnown RBP19.44■□□□□ 0.7
HDAC6-202ENST00000376610 FAM237AA0A1B0GTK4 181 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 ENGP17813 658 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 CHKAP35790 457 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 MXI1P50539 228 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 GFPT1Q06210 699 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-202ENST00000376610 FOXC1Q12948 553 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 DUOXA1Q1HG43 343 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 ZNF394Q53GI3 561 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 PPP1R26Q5T8A7 1209 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-202ENST00000376610 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 HDDC3Q8N4P3 179 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 ZNF276Q8N554 614 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 BHMTQ93088 406 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 FAXDC2Q96IV6 333 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 GABRG3Q99928 467 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 DCLK3Q9C098 648 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 RASAL2Q9UJF2 1139 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 SLC6A14Q9UN76 642 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 CYP8B1Q9UNU6 501 aa19.43■□□□□ 0.7
HDAC6-202ENST00000376610 A0A1W2PQ27 194 aa19.42■□□□□ 0.7
HDAC6-202ENST00000376610 A0A1W2PQ64 194 aa19.42■□□□□ 0.7
HDAC6-202ENST00000376610 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
HDAC6-202ENST00000376610 A0A1W2PQF6 199 aa19.42■□□□□ 0.7
HDAC6-202ENST00000376610 GFRA2O00451 464 aa19.42■□□□□ 0.7
HDAC6-202ENST00000376610 STC2O76061 302 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms