RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FAM182AQ5T1J6 154 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 MAP7D3Q8IWC1 876 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 RIBC1Q8N443 379 aaPredicted RBP14.53□□□□□ -0.08
MSH5-202ENST00000375740 CLEC4CQ8WTT0 213 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 STK32AQ8WU08 396 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 GOLGA2P5Q9HBQ8 144 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 RXFP1Q9HBX9 757 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 PRKAG3Q9UGI9 489 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 RASA4BC9J798 803 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 RASA4O43374 803 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 TFE3P19532 575 aaPredicted RBP14.53□□□□□ -0.08
MSH5-202ENST00000375740 CPT1AP50416 773 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 ROR1Q01973 937 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 SOX4Q06945 474 aaPredicted RBP14.53□□□□□ -0.08
MSH5-202ENST00000375740 PDK2Q15119 407 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 CA9Q16790 459 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 LONP2Q86WA8 852 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 CRYBG2Q8N1P7 616 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.53□□□□□ -0.08
MSH5-202ENST00000375740 PYROXD1Q8WU10 500 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 XPO7Q9UIA9 1087 aaKnown RBP14.53□□□□□ -0.08
MSH5-202ENST00000375740 ARL2BPQ9Y2Y0 163 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 PDCD11Q14690 1871 aaKnown RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 H7C0C1 242 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 TMEM63AO94886 807 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 STIP1P31948 543 aaKnown RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 ATP5OP48047 213 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 HUNKP57058 714 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 SNX16P57768 344 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 BASP1P80723 227 aaKnown RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 ROR2Q01974 943 aaKnown RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 MTM1Q13496 603 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 IRF5Q13568 498 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 ECHDC2Q86YB7 292 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 TDRPQ86YL5 185 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 PLD5Q8N7P1 536 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 ANKRD52Q8NB46 1076 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 MRRFQ96E11 262 aaKnown RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 LBHD1Q9BQE6 289 aaPredicted RBP14.52□□□□□ -0.08
MSH5-202ENST00000375740 SNX25Q9H3E2 840 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 PCDH18Q9HCL0 1135 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 SH3BP1Q9Y3L3 701 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 ACTL7BQ9Y614 415 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 CLUHO75153 1309 aa14.52□□□□□ -0.08
MSH5-202ENST00000375740 TPBGLP0DKB5 382 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 LCP1P13796 627 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 KCNE1P15382 129 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 SSTR1P30872 391 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 CRYBB1P53674 252 aaPredicted RBP14.52□□□□□ -0.09
MSH5-202ENST00000375740 HDAC4P56524 1084 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 TAF1CQ15572 869 aaPredicted RBP14.52□□□□□ -0.09
MSH5-202ENST00000375740 PKN2Q16513 984 aaKnown RBP14.52□□□□□ -0.09
MSH5-202ENST00000375740 XKR4Q5GH76 650 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 TMEM154Q6P9G4 183 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 TRABD2AQ86V40 505 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 ZDHHC17Q8IUH5 632 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 MFN1Q8IWA4 741 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 PQLC3Q8N755 202 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 ARRDC4Q8NCT1 418 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 UCMAQ8WVF2 138 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 CKAP2Q8WWK9 683 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 USP6NLQ92738 828 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 SNRNP25Q9BV90 132 aaKnown RBP14.52□□□□□ -0.09
MSH5-202ENST00000375740 RNPEPL1Q9HAU8 725 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 GDAP2Q9NXN4 497 aa14.52□□□□□ -0.09
MSH5-202ENST00000375740 C17orf102A2RUQ5 167 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 CCNB1P14635 433 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 CALB2P22676 271 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 BST2Q10589 180 aaKnown RBP14.51□□□□□ -0.09
MSH5-202ENST00000375740 SMG8Q8ND04 991 aaKnown RBP14.51□□□□□ -0.09
MSH5-202ENST00000375740 PCDH19Q8TAB3 1148 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 TTC8Q8TAM2 541 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 ZNF560Q96MR9 790 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 EPAS1Q99814 870 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 UBN1Q9NPG3 1134 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 RABGEF1Q9UJ41 708 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 IPPQ9Y573 584 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 ASB3Q9Y575 518 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 HEY1Q9Y5J3 304 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 APOL1O14791 398 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 UNC5CO95185 931 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 TAF6P49848 677 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 NR1H3Q13133 447 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 BBS9Q3SYG4 887 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 GALNT15Q8N3T1 639 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 TEX9Q8N6V9 391 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 GBP7Q8N8V2 638 aaPredicted RBP14.51□□□□□ -0.09
MSH5-202ENST00000375740 FBXO36Q8NEA4 188 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 APPL2Q8NEU8 664 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 WDR83Q9BRX9 315 aaKnown RBP14.51□□□□□ -0.09
MSH5-202ENST00000375740 USP29Q9HBJ7 922 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 NKIRAS1Q9NYS0 192 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 DLGAP2Q9P1A6 1054 aa14.51□□□□□ -0.09
MSH5-202ENST00000375740 E7ESA3 106 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 XPOTO43592 962 aaKnown RBP14.5□□□□□ -0.09
MSH5-202ENST00000375740 SPAG7O75391 227 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 TARSP26639 723 aaKnown RBP14.5□□□□□ -0.09
MSH5-202ENST00000375740 STX2P32856 288 aa14.5□□□□□ -0.09
MSH5-202ENST00000375740 ATXN1P54253 815 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms