RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 VWA5AO00534 786 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 MICAL2O94851 1124 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 HMGCRP04035 888 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 KCNA2P16389 499 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 TM4SF1P30408 202 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 HADHBP55084 474 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 PTK2BQ14289 1009 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 ACAP1Q15027 740 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 FAM83EQ2M2I3 478 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 ZNF772Q68DY9 489 aaPredicted RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 TTC33Q6PID6 262 aaPredicted RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 PTF1AQ7RTS3 328 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 SNRNP27Q8WVK2 155 aaKnown RBP17.33■□□□□ 0.36
VARS-215ENST00000375663 SPON2Q9BUD6 331 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 FAM192AQ9GZU8 254 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 DMAC2Q9NW81 257 aa17.33■□□□□ 0.36
VARS-215ENST00000375663 ASTN2O75129 1339 aaPredicted RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 STRNO43815 780 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 PMPCBO75439 489 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 CCDC15Q0P6D6 951 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 NPNTQ6UXI9 565 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 42.6
VARS-215ENST00000375663 USP13Q92995 863 aaPredicted RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 ULK4Q96C45 1275 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 PABPC5Q96DU9 382 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 MFSD14AQ96MC6 490 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 APPL1Q9UKG1 709 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 BARX2Q9UMQ3 279 aaPredicted RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 E5RI56 91 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 SLC25A3Q00325 362 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 OASLQ15646 514 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 UGCGQ16739 394 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 ZBTB41Q5SVQ8 909 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 KYAT3Q6YP21 454 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 CALML6Q8TD86 181 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 TYW5A2RUC4 315 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 TRIM13O60858 407 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 HSPA1AP0DMV8 641 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 HSPA1BP0DMV9 641 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 ABCE1P61221 599 aaKnown RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 C6orf10Q5SRN2 563 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 ZNF786Q8N393 782 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 C12orf50Q8NA57 414 aaPredicted RBP17.32■□□□□ 0.36
VARS-215ENST00000375663 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
VARS-215ENST00000375663 MGAT1P26572 445 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 CES3Q6UWW8 571 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 TRIM62Q9BVG3 475 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 ARL8BQ9NVJ2 186 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 H2AFYO75367 372 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 ATICP31939 592 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 IMPG1Q17R60 797 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 SPOUT1Q5T280 376 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 DCAF12L1Q5VU92 463 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 CLEC4FQ8N1N0 589 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 PORCNQ9H237 461 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 NMRK1Q9NWW6 199 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 ACOT9Q9Y305 439 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 TCRBV9S1A1TA0A576 114 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 PRPF4O43172 522 aaKnown RBP eCLIP17.31■□□□□ 0.36
VARS-215ENST00000375663 SUPT7LO94864 414 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 PPARGP37231 505 aaPredicted RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 FASTKD3Q14CZ7 662 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 C15orf59Q2T9L4 293 aaPredicted RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 RIPOR1Q6ZS17 1223 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 LINC00523Q86TU6 105 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 CPNE8Q86YQ8 564 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 SCUBE3Q8IX30 993 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 HTR3CQ8WXA8 447 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 ZNF317Q96PQ6 595 aaPredicted RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 TSR3Q9UJK0 312 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 NOCTQ9UK39 431 aaKnown RBP17.31■□□□□ 0.36
VARS-215ENST00000375663 RGPD1P0DJD0 1748 aa17.31■□□□□ 0.36
VARS-215ENST00000375663 E5RJQ4 531 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 CHADO15335 359 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 AMPD1P23109 780 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
VARS-215ENST00000375663 BCAT1P54687 386 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 ZNF235Q14590 738 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 ADRM1Q16186 407 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
VARS-215ENST00000375663 TMEM191CA6NGB0 347 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 F8W8V4 182 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 SLCO1B7G3V0H7 640 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 CAPRIN1Q14444 709 aaKnown RBP17.3■□□□□ 0.36
VARS-215ENST00000375663 POLNQ7Z5Q5 900 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 RMDN1Q96DB5 314 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 GCNAQ96QF7 691 aa17.3■□□□□ 0.36
VARS-215ENST00000375663 SIKE1Q9BRV8 207 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms