RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FAM91A1Q658Y4 838 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 WDTC1Q8N5D0 677 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 ARFGAP1Q8N6T3 406 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 B4GALNT2Q8NHY0 566 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 PPP1R14CQ8TAE6 165 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TFAP2BQ92481 460 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 C7orf26Q96N11 449 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
CCDC40-203ENST00000374877 PLLPQ9Y342 182 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TEX264Q9Y6I9 313 aa11.51□□□□□ -0.57
CCDC40-203ENST00000374877 TMEM88BA6NKF7 163 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CXorf49A8MYA2 514 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 FAM155AB1AL88 458 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ZNF132P52740 706 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 EPHB1P54762 984 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ROR1Q01973 937 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 SREBF2Q12772 1141 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 LIN52Q52LA3 116 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CES4AQ5XG92 561 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CCDC60Q8IWA6 550 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 KIAA0319LQ8IZA0 1049 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ST13P4Q8IZP2 240 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ARHGAP18Q8N392 663 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 NIPA2Q8N8Q9 360 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 HIPK4Q8NE63 616 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 PPP2R3CQ969Q6 453 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 EBF4Q9BQW3 602 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 PORCNQ9H237 461 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 RAB6BQ9NRW1 208 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 A0A0B4J269 797 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 H7C0C1 242 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 UGT1A9O60656 530 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 TOMM70O94826 608 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 TSHRP16473 764 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CRABP2P29373 138 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ATP5OP48047 213 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CDK7P50613 346 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 MYL6P60660 151 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 EZH1Q92800 747 aaPredicted RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 MTMR12Q9C0I1 747 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 VCX3BQ9H321 246 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 UGT1A7Q9HAW7 530 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 UGT1A10Q9HAW8 530 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 UGT1A8Q9HAW9 530 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 VCX3AQ9NNX9 186 aa11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ZC3H7BQ9UGR2 993 aaKnown RBP11.5□□□□□ -0.57
CCDC40-203ENST00000374877 ASB14A6NK59 587 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 APOC4-APOC2K7ER74 178 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 IL1BP01584 269 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 APOC2P02655 101 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 C6orf222P0C671 652 aaPredicted RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TGFB3P10600 412 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 MRPS5P82675 430 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 ASPHQ12797 758 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 HIC1Q14526 733 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 EMC2Q15006 297 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SLC5A9Q2M3M2 681 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 PTPN20Q4JDL3 420 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 DENND1BQ6P3S1 775 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SESTD1Q86VW0 696 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 THNSL1Q8IYQ7 743 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 POU5F2Q8N7G0 328 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TCHPQ9BT92 498 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 FRMD8P1Q9BZ68 369 aaPredicted RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 IRAK4Q9NWZ3 460 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 LRRC37A2A6NM11 1700 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TOM1L1O75674 476 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 PSAPP07602 524 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 STIP1P31948 543 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 LGSNQ5TDP6 509 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SLFN12LQ6IEE8 588 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 NDUFAF2Q8N183 169 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 OR6Y1Q8NGX8 325 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 APOL6Q9BWW8 343 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SHCBP1LQ9BZQ2 653 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 C20orf27Q9GZN8 174 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 R3HDMLQ9H3Y0 253 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 HBS1LQ9Y450 684 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TXNDC9O14530 226 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 DKC1O60832 514 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 SPAG6O75602 509 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 STBD1O95210 358 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 TOP3BO95985 862 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 LDHAP00338 332 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
CCDC40-203ENST00000374877 ZNF792Q3KQV3 632 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 MROH9Q5TGP6 573 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 LPCAT4Q643R3 524 aa11.49□□□□□ -0.57
CCDC40-203ENST00000374877 C1orf228Q6PIY5 440 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms