RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 INPP5FQ9Y2H2 1132 aa19.01■□□□□ 0.63
RXRB-202ENST00000374685 FARP1Q9Y4F1 1045 aaPredicted RBP19.01■□□□□ 0.63
RXRB-202ENST00000374685 MRPL42Q9Y6G3 142 aaKnown RBP19.01■□□□□ 0.63
RXRB-202ENST00000374685 CLUHO75153 1309 aa19■□□□□ 0.63
RXRB-202ENST00000374685 XPOTO43592 962 aaKnown RBP19■□□□□ 0.63
RXRB-202ENST00000374685 AKR1A1P14550 325 aa19■□□□□ 0.63
RXRB-202ENST00000374685 ACAP1Q15027 740 aa19■□□□□ 0.63
RXRB-202ENST00000374685 SV2CQ496J9 727 aa19■□□□□ 0.63
RXRB-202ENST00000374685 BOLA3Q53S33 107 aa19■□□□□ 0.63
RXRB-202ENST00000374685 UNC93AQ86WB7 457 aa19■□□□□ 0.63
RXRB-202ENST00000374685 DEFB106AQ8N104 65 aa19■□□□□ 0.63
RXRB-202ENST00000374685 TRIM56Q9BRZ2 755 aaKnown RBP19■□□□□ 0.63
RXRB-202ENST00000374685 KATNAL1Q9BW62 490 aa19■□□□□ 0.63
RXRB-202ENST00000374685 RHOBTB2Q9BYZ6 727 aa19■□□□□ 0.63
RXRB-202ENST00000374685 SAMD15Q9P1V8 674 aa19■□□□□ 0.63
RXRB-202ENST00000374685 EFR3BQ9Y2G0 817 aa19■□□□□ 0.63
RXRB-202ENST00000374685 ALOX15BO15296 676 aa19■□□□□ 0.63
RXRB-202ENST00000374685 GNAT1P11488 350 aa19■□□□□ 0.63
RXRB-202ENST00000374685 AMPD1P23109 780 aa19■□□□□ 0.63
RXRB-202ENST00000374685 CLCNKBP51801 687 aa19■□□□□ 0.63
RXRB-202ENST00000374685 ZFYVE28Q9HCC9 887 aa19■□□□□ 0.63
RXRB-202ENST00000374685 ETNK2Q9NVF9 386 aa19■□□□□ 0.63
RXRB-202ENST00000374685 CREB3O43889 395 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 POMCP01189 267 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 ELK3P41970 407 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 SULT1E1P49888 294 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 SCNN1GP51170 649 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 TAZQ16635 292 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 TRABDQ9H4I3 376 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 MIOSQ9NXC5 875 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 LAMA2P24043 3122 aaKnown RBP18.99■□□□□ 0.63
RXRB-202ENST00000374685 WDR91A4D1P6 747 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 GOT1P17174 413 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 AXLP30530 894 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
RXRB-202ENST00000374685 SPOCK2Q92563 424 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 TTC25Q96NG3 672 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 KCNK16Q96T55 309 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 LRRC4Q9HBW1 653 aa18.99■□□□□ 0.63
RXRB-202ENST00000374685 DDX43Q9NXZ2 648 aaKnown RBP18.99■□□□□ 0.63
RXRB-202ENST00000374685 GHRP10912 638 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 GBP2P32456 591 aaPredicted RBP18.98■□□□□ 0.63
RXRB-202ENST00000374685 GCKP35557 465 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 THPOP40225 353 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 HFE2Q6ZVN8 426 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 PCGF5Q86SE9 256 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 CCDC197Q8NCU1 140 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 TRIB2Q92519 343 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 TNIP3Q96KP6 325 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 TGS1Q96RS0 853 aaKnown RBP18.98■□□□□ 0.63
RXRB-202ENST00000374685 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
RXRB-202ENST00000374685 UBN1Q9NPG3 1134 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 KRT82Q9NSB4 513 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 CA4P22748 312 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 MRPS6P82932 125 aaKnown RBP18.98■□□□□ 0.63
RXRB-202ENST00000374685 KIAA0319Q5VV43 1072 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 BSPRYQ5W0U4 402 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 DSTYKQ6XUX3 929 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 USP6NLQ92738 828 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 CENPTQ96BT3 561 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 RSRC1Q96IZ7 334 aaKnown RBP18.98■□□□□ 0.63
RXRB-202ENST00000374685 FAM105AQ9NUU6 356 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 SEPT10Q9P0V9 454 aa18.98■□□□□ 0.63
RXRB-202ENST00000374685 MKI67P46013 3256 aaKnown RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 PTPN1P18031 435 aaKnown RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 FLT3LGP49771 235 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 SLC10A2Q12908 348 aaPredicted RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 ARHGAP17Q68EM7 881 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 CTAGE3PQ8IX95 158 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 SIX6OS1Q8N1H7 587 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 C3orf58Q8NDZ4 430 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 SENP8Q96LD8 212 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 NRDE2Q9H7Z3 1164 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 AGO3Q9H9G7 860 aaKnown RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.97■□□□□ 0.639e-6■■■■□ 24.8
RXRB-202ENST00000374685 EME2A4GXA9 379 aaPredicted RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 KCNE1P15382 129 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 RNASELQ05823 741 aaKnown RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 SYPL2Q5VXT5 272 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.97■□□□□ 0.63
RXRB-202ENST00000374685 ATP11CQ8NB49 1132 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 MAML1Q92585 1016 aa18.97■□□□□ 0.63
RXRB-202ENST00000374685 KCTD15Q96SI1 283 aaPredicted RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 ALG13Q9NP73 1137 aaKnown RBP18.97■□□□□ 0.63
RXRB-202ENST00000374685 MYBPHLA2RUH7 354 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 KBTBD13C9JR72 458 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 SETSIPP0DME0 302 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 ELNP15502 786 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 KRT4P19013 534 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 CD52P31358 61 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 PNPLA4P41247 253 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 SNX16P57768 344 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 XRCC4Q13426 336 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 E2F5Q15329 346 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 FAM133BQ5BKY9 247 aaKnown RBP18.96■□□□□ 0.63
RXRB-202ENST00000374685 CRYBG2Q8N1P7 616 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 SMC6Q96SB8 1091 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 PAFAH2Q99487 392 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 FOXP3Q9BZS1 431 aa18.96■□□□□ 0.63
RXRB-202ENST00000374685 USP29Q9HBJ7 922 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms