RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 EVPLQ92817 2033 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 FAM237BA0A1B0GVD1 139 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 CAPN9O14815 690 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 PPP1R12AO14974 1030 aaPredicted RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 HBP1O60381 514 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 AVILO75366 819 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 CNMDO75829 334 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 GJB1P08034 283 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 CALRP27797 417 aaKnown RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 CRHR1P34998 444 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 TMPRSS15P98073 1019 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 MBTD1Q05BQ5 628 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 INCA1Q0VD86 236 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 DNAL1Q4LDG9 190 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 ARCQ7LC44 396 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 CDR2LQ86X02 465 aaPredicted RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 ANKRD13AQ8IZ07 590 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 TRAPPC12Q8WVT3 735 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 HEXIM2Q96MH2 286 aaKnown RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 PRMT7Q9NVM4 692 aaPredicted RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 DNAJB4Q9UDY4 337 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 BARX2Q9UMQ3 279 aaPredicted RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 STAU1O95793 577 aaKnown RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 MCF2P10911 925 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 MAGEA3P43357 314 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 POU5F1BQ06416 359 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 BST1Q10588 318 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 C6orf163Q5TEZ5 329 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 C1orf228Q6PIY5 440 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 TIFABQ6ZNK6 161 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 CDHR3Q6ZTQ4 885 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 NET1Q7Z628 596 aaPredicted RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 CRLF3Q8IUI8 442 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 NUDCD3Q8IVD9 361 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 PDCD7Q8N8D1 485 aaKnown RBP18.61■□□□□ 0.57
PHF1-201ENST00000374512 CXorf38Q8TB03 319 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 ZNF670Q9BS34 389 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 IFT122Q9HBG6 1241 aa18.61■□□□□ 0.57
PHF1-201ENST00000374512 SLC15A5A6NIM6 579 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 KRT36O76013 467 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 ITGB3P05106 788 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 NFICP08651 508 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 TPSB2P20231 275 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 IL4RP24394 825 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 CLCN3P51790 818 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 NRLP54845 237 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 MRPS5P82675 430 aaKnown RBP18.6■□□□□ 0.57
PHF1-201ENST00000374512 TPSAB1Q15661 275 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 NBPF20Q3BBV1 942 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 CDKL3Q8IVW4 592 aaPredicted RBP18.6■□□□□ 0.57
PHF1-201ENST00000374512 GSDMBQ8TAX9 411 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 SCG3Q8WXD2 468 aaKnown RBP18.6■□□□□ 0.57
PHF1-201ENST00000374512 GCOM2Q9BZD3 368 aaPredicted RBP18.6■□□□□ 0.57
PHF1-201ENST00000374512 C1orf21Q9H246 121 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 R3HDMLQ9H3Y0 253 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 HMGXB4Q9UGU5 601 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 ANGPTL2Q9UKU9 493 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 MCM3APO60318 1980 aa18.6■□□□□ 0.57
PHF1-201ENST00000374512 DPPA5A6NC42 116 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 FAM159BA6NKW6 160 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 LACTBL1A8MY62 500 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 B2RBV5 119 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 KIF3CO14782 793 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 MDM4O15151 490 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 SNNO75324 88 aaPredicted RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 TBX10O75333 385 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 SNX16P57768 344 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 WASHC5Q12768 1159 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 TRMT5Q32P41 509 aaKnown RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 TEX44Q53QW1 395 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 OR6B2Q6IFH4 312 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 TMEM192Q8IY95 271 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 PRR11Q96HE9 360 aaPredicted RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 MINDY3Q9H8M7 445 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 XAB2Q9HCS7 855 aaKnown RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 TAGLN3Q9UI15 199 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 GCATO75600 419 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 APRTP07741 180 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 RBL1P28749 1068 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 KCTD2Q14681 263 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 FAM183BPQ6ZVS7 135 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 TTC7BQ86TV6 843 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 PQLC3Q8N755 202 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 EBNA1BP2Q99848 306 aaKnown RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 STN1Q9H668 368 aaKnown RBP18.59■□□□□ 0.57
PHF1-201ENST00000374512 PCDH18Q9HCL0 1135 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
PHF1-201ENST00000374512 UTRNP46939 3433 aa18.58■□□□□ 0.57
PHF1-201ENST00000374512 CXorf49A8MYA2 514 aaPredicted RBP18.58■□□□□ 0.57
PHF1-201ENST00000374512 SPECC1L-ADORA2AF8WAN1 911 aa18.58■□□□□ 0.57
PHF1-201ENST00000374512 MAP3K7O43318 606 aa18.58■□□□□ 0.57
PHF1-201ENST00000374512 BPGMP07738 259 aa18.58■□□□□ 0.57
PHF1-201ENST00000374512 STAG3L1P0CL83 205 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms