RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 SLC1A5Q15758 541 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 AGBL2Q5U5Z8 902 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TRMT10CQ7L0Y3 403 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ALLCQ8N6M5 410 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CNPY3Q9BT09 278 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 FAM129AQ9BZQ8 928 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 NSRP1Q9H0G5 558 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ETNK1Q9HBU6 452 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 KLHL14Q9P2G3 628 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 GABRQQ9UN88 632 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CDY2AQ9Y6F7 541 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 A8MUI8 341 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 PDE1BQ01064 536 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 LMNB2Q03252 620 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CLUL1Q15846 466 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CST9Q5W186 159 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 KLHL29Q96CT2 875 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 RILPQ96NA2 401 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF518BQ9C0D4 1074 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CHCHD3Q9NX63 227 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 LGR5O75473 907 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 TRPA1O75762 1119 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 FLT3LGP49771 235 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 SLC26A2P50443 739 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 RPS6KA3P51812 740 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 PTK7Q13308 1070 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 PCSK7Q16549 785 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 C9orf57Q5W0N0 161 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 CDCA2Q69YH5 1023 aaPredicted RBP11.21□□□□□ -0.61
CXCL12-203ENST00000374429 TRMT10BQ6PF06 316 aaKnown RBP11.21□□□□□ -0.61
CXCL12-203ENST00000374429 LRRC6Q86X45 466 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 MIB1Q86YT6 1006 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 TMEM165Q9HC07 324 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 MCM8Q9UJA3 840 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 L3MBTL1Q9Y468 752 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 NME7Q9Y5B8 376 aa11.21□□□□□ -0.61
CXCL12-203ENST00000374429 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 CFAP69A5D8W1 941 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 C9IYK1 514 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 TP73O15350 636 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 MSI1O43347 362 aaKnown RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 SHOX2O60902 331 aaPredicted RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 PYGLP06737 847 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 ATP2A2P16615 1042 aaKnown RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 DRD4P21917 467 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 TAF6P49848 677 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 GJA9P57773 515 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 IL9RQ01113 521 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 DEUP1Q05D60 604 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 PCDH19Q8TAB3 1148 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 SCAMP5Q8TAC9 235 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 TCP10LQ8TDR4 215 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 ERP27Q96DN0 273 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 STRNO43815 780 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 PIGRP01833 764 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 DARSP14868 501 aaKnown RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 FOXN2P32314 431 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 MXRA7P84157 204 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 CRHR2Q13324 411 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 EXOC8Q8IYI6 725 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 HIPK4Q8NE63 616 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 WNT8BQ93098 351 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 AZIN2Q96A70 460 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 VPS11Q9H270 941 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 ASB7Q9H672 318 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.62
CXCL12-203ENST00000374429 ARMCX1Q9P291 453 aa11.21□□□□□ -0.62
CXCL12-203ENST00000374429 NUP205Q92621 2012 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 IGKV6-21A0A0C4DH24 114 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 LPXNO60711 386 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 CBX6O95503 412 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 EPHB2P29323 1055 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 OR1G1P47890 313 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 KCNJ2P63252 427 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 SLC25A11Q02978 314 aaKnown RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 TFAP2DQ7Z6R9 452 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 SENP8Q96LD8 212 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 TMEM209Q96SK2 561 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 CNOT10Q9H9A5 744 aaKnown RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 SFMBT1Q9UHJ3 866 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 HAO1Q9UJM8 370 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 WDR27A2RRH5 827 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms