RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 BDNFP23560 247 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 HADHBP55084 474 aaKnown RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 TAF1BQ53T94 588 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 TTC39BQ5VTQ0 682 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 ZNF410Q86VK4 478 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 LONP2Q86WA8 852 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 MYLK4Q86YV6 388 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 PPTC7Q8NI37 304 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 HDAC11Q96DB2 347 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 HERPUD2Q9BSE4 406 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 WDR27A2RRH5 827 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 MMP3P08254 477 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 GBE1Q04446 702 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 MMEL1Q495T6 779 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 ILDR2Q71H61 639 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 CLEC4CQ8WTT0 213 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 GTSE1Q9NYZ3 720 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 SLC39A10Q9ULF5 831 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 GRIN2DO15399 1336 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 C3orf70A6NLC5 250 aaPredicted RBP14.02□□□□□ -0.16
CLIC4-201ENST00000374379 C2CD2LO14523 706 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 MTA2O94776 668 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 ZWINTO95229 277 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 EDN1P05305 212 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 PMLP29590 882 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 GLRBP48167 497 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 GAD2Q05329 585 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 MGAT5BQ3V5L5 792 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.16
CLIC4-201ENST00000374379 LRRC38Q5VT99 294 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 GLB1LQ6UWU2 654 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 ATPAF2Q8N5M1 289 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 PPME1Q9Y570 386 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 LMO2P25791 158 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 MMP13P45452 471 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 ZDHHC14Q8IZN3 488 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 RAET1EQ8TD07 263 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 ALKBH8Q96BT7 664 aaKnown RBP14.02□□□□□ -0.16
CLIC4-201ENST00000374379 TBCBQ99426 244 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 SP110Q9HB58 689 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 IL1RAPL1Q9NZN1 696 aa14.02□□□□□ -0.16
CLIC4-201ENST00000374379 RGS17Q9UGC6 210 aaPredicted RBP14.02□□□□□ -0.16
CLIC4-201ENST00000374379 NRCAMQ92823 1304 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 CBX6O95503 412 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 MX2P20592 715 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 MGAT1P26572 445 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 AVPR1AP37288 418 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.17
CLIC4-201ENST00000374379 ITPRIPL1Q6GPH6 555 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 C16orf46Q6P387 395 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 SLC26A11Q86WA9 606 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
CLIC4-201ENST00000374379 NOP53Q9NZM5 478 aaKnown RBP14.02□□□□□ -0.17
CLIC4-201ENST00000374379 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 C2CD2Q9Y426 696 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 NRAPQ86VF7 1730 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.17
CLIC4-201ENST00000374379 SPECC1L-ADORA2AF8WAN1 911 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 RNF103O00237 685 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SNX3O60493 162 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 FAM155BO75949 473 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 POLBP06746 335 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 PDHA1P08559 390 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 PEX19P40855 299 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
CLIC4-201ENST00000374379 ARHGAP1Q07960 439 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SLC12A1Q13621 1099 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 USP10Q14694 798 aaKnown RBP14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SMIM28A0A1B0GU29 152 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SHOX2O60902 331 aaPredicted RBP14.01□□□□□ -0.17
CLIC4-201ENST00000374379 TGM2P21980 687 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 HTR3CQ8WXA8 447 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 CFAP73A6NFT4 308 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 MYL2P10916 166 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 PYROXD2Q8N2H3 581 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 MAML3Q96JK9 1138 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SDCBP2Q9H190 292 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 ARMCX1Q9P291 453 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SLC24A2Q9UI40 661 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 L3MBTL1Q9Y468 752 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 LAMB1P07942 1786 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 ITGAVP06756 1048 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 PRAMEP78395 509 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 FNBP1LQ5T0N5 605 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 TFAP2DQ7Z6R9 452 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 B3GALNT2Q8NCR0 500 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
CLIC4-201ENST00000374379 SETSIPP0DME0 302 aa14□□□□□ -0.17
CLIC4-201ENST00000374379 PTPN1P18031 435 aaKnown RBP14□□□□□ -0.17
CLIC4-201ENST00000374379 MAP3K10Q02779 954 aa14□□□□□ -0.17
CLIC4-201ENST00000374379 CCL14Q16627 93 aa14□□□□□ -0.17
CLIC4-201ENST00000374379 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
CLIC4-201ENST00000374379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14□□□□□ -0.17
CLIC4-201ENST00000374379 SKA2Q8WVK7 121 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms