RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TRPM8Q7Z2W7 1104 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 TDRPQ86YL5 185 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 CDY2AQ9Y6F7 541 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 I3L4J1 428 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 MDM4O15151 490 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 GRIA1P42261 906 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 IL9RQ01113 521 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 KCNT2Q6UVM3 1135 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 PPP1R21Q6ZMI0 780 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 SPATA21Q7Z572 469 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 TEKT4Q8WW24 435 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 RMDN2Q96LZ7 410 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 CSPG4P5Q96PW8 444 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 MIOSQ9NXC5 875 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ACTL7BQ9Y614 415 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ZNF638Q14966 1978 aaKnown RBP16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 TGM2P21980 687 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ITIH4Q14624 930 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 SYPL2Q5VXT5 272 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 PAQR9Q6ZVX9 377 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 DENND1AQ8TEH3 1009 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 DCAKDQ8WVC6 231 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 USP6NLQ92738 828 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 LGMNQ99538 433 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ZNF670Q9BS34 389 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 RHOBTB2Q9BYZ6 727 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 PITPNM3Q9BZ71 974 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 SLC24A2Q9UI40 661 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 ST3GAL5Q9UNP4 418 aa16.59■□□□□ 0.25
CNKSR1-202ENST00000374253 PDCD11Q14690 1871 aaKnown RBP16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 UBOX5O94941 541 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 OAS1P00973 400 aaKnown RBP16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 DESP17661 470 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 RGS2P41220 211 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 CLCNKBP51801 687 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 YWHAZP63104 245 aaKnown RBP16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 C17orf99Q6UX52 265 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 CTAGE3PQ8IX95 158 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 TP53INP2Q8IXH6 220 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 KCNK16Q96T55 309 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM124BQ9H5Z6 455 aaPredicted RBP16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 PAK5Q9P286 719 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 TEX264Q9Y6I9 313 aa16.58■□□□□ 0.25
CNKSR1-202ENST00000374253 XPOTO43592 962 aaKnown RBP16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 CREB3O43889 395 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 ADRA1DP25100 572 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 PTPN9P43378 593 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 DPYSL2Q16555 572 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 XKR4Q5GH76 650 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 CAND1Q86VP6 1230 aaKnown RBP16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 ZDHHC17Q8IUH5 632 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 MPP5Q8N3R9 675 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 CCDC63Q8NA47 563 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 C3orf58Q8NDZ4 430 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 GSTCDQ8NEC7 633 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 SGSM3Q96HU1 749 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 TNIP3Q96KP6 325 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 KDM4CQ9H3R0 1056 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 SLC17A7Q9P2U7 560 aa16.58■□□□□ 0.24
CNKSR1-202ENST00000374253 TYROBPO43914 113 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 PNPLA4P41247 253 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 CACNA2D1P54289 1103 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 SNX16P57768 344 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 MGAT5Q09328 741 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 TRIM32Q13049 653 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 NR1H3Q13133 447 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 ADGRD1Q6QNK2 874 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 CENPIQ92674 756 aaPredicted RBP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 SLC40A1Q9NP59 571 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 KRT82Q9NSB4 513 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 TMEM30AQ9NV96 361 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 DDX43Q9NXZ2 648 aaKnown RBP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 DTLQ9NZJ0 730 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 CXorf49A8MYA2 514 aaPredicted RBP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 NDC80O14777 642 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 UGT1A9O60656 530 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 SUN1O94901 812 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 HNRNPH1P31943 449 aaKnown RBP16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 PTK7Q13308 1070 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 CRHR2Q13324 411 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 SPARCL1Q14515 664 aa16.57■□□□□ 0.24
CNKSR1-202ENST00000374253 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms