RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PAK6Q9NQU5 681 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 IL37Q9NZH6 218 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 I6L893 689 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 PIK3R2O00459 728 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 GRAP2O75791 330 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 EIF3EP60228 445 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 SLC10A2Q12908 348 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 PRKD1Q15139 912 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 TRIP13Q15645 432 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 ATXN2LQ8WWM7 1075 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 KRT82Q9NSB4 513 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 C5orf60A6NFR6 353 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 NRP1O14786 923 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 APOL1O14791 398 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 MAGEA4P43358 317 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 LMAN1P49257 510 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 GPS1Q13098 491 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 KCTD16Q68DU8 428 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 MAML1Q92585 1016 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 RBM15Q96T37 977 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 FRMD8Q9BZ67 464 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 CLUHO75153 1309 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 HACD1B0YJ81 288 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 STAT4Q14765 748 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 DEFB106AQ8N104 65 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
PRPF4-202ENST00000374199 GGA2Q9UJY4 613 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 MCF2LO15068 1137 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 DCLK1O15075 740 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 TMEM63AO94886 807 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 LCP1P13796 627 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 CAPN2P17655 700 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 LSP1P33241 339 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 GPX6P59796 221 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ROR1Q01973 937 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 KRT71Q3SY84 523 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 MCUQ8NE86 351 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 PWWP2AQ96N64 755 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 ZCWPW1Q9H0M4 648 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 EPN3Q9H201 632 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 TMLHEQ9NVH6 421 aa13.07□□□□□ -0.32
PRPF4-202ENST00000374199 DNM1LO00429 736 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 TRAPPC3O43617 180 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 RBP3P10745 1247 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 CYP2F1P24903 491 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 HOXC13P31276 330 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 NDUFV1P49821 464 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
PRPF4-202ENST00000374199 ATP11AP98196 1134 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 AGGF1Q8N302 714 aaeCLIP13.06□□□□□ -0.32
PRPF4-202ENST00000374199 P3H4Q92791 437 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 TBC1D4O60343 1298 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 CXCL10P02778 98 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 ITGB1P05556 798 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 GLUD2P49448 558 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 CXCR3P49682 368 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 MAGOHP61326 146 aaKnown RBP13.06□□□□□ -0.32
PRPF4-202ENST00000374199 SLC45A4Q5BKX6 768 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 EFHC2Q5JST6 749 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 SYPL2Q5VXT5 272 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 HFE2Q6ZVN8 426 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 MZB1Q8WU39 189 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 MYLPFQ96A32 169 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 GLT1D1Q96MS3 346 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 PLAC1Q9HBJ0 212 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 ANLNQ9NQW6 1124 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 PIGVQ9NUD9 493 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
PRPF4-202ENST00000374199 NOVA2Q9UNW9 492 aaKnown RBP13.06□□□□□ -0.32
PRPF4-202ENST00000374199 CASTOR2A6NHX0 329 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 RASGRF2O14827 1237 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 TKTL1P51854 596 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 SLC8A3P57103 927 aa13.05□□□□□ -0.32
PRPF4-202ENST00000374199 PITX1P78337 314 aaPredicted RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 MAPRE1Q15691 268 aaKnown RBP13.05□□□□□ -0.32
PRPF4-202ENST00000374199 KYNUQ16719 465 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms