RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 RGS18Q9NS28 235 aa13.81□□□□□ -0.2
A1CF-204ENST00000373997 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
A1CF-204ENST00000373997 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
A1CF-204ENST00000373997 PTPRDP23468 1912 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 C9IYK1 514 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 I3L4J1 428 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 KRT3P12035 628 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 PTPN7P35236 360 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 TAP1Q03518 808 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 MGAT5Q09328 741 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 BFSP2Q13515 415 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 PARP6Q2NL67 630 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 FAM102AQ5T9C2 384 aaPredicted RBP13.8□□□□□ -0.2
A1CF-204ENST00000373997 OR6B2Q6IFH4 312 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 EMC1Q8N766 993 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 MIEF2Q96C03 454 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
A1CF-204ENST00000373997 F8VP50 259 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 NBNO60934 754 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TCF4P15884 667 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PSMA2P25787 234 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 RFC1P35251 1148 aaPredicted RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 GABRB2P47870 512 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 UPP1Q16831 310 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PKDCCQ504Y2 493 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SPDYAQ5MJ70 313 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PMF1Q6P1K2 205 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 FAM183BPQ6ZVS7 135 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 KIF2BQ8N4N8 673 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 B3GALNT2Q8NCR0 500 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SLC2A14Q8TDB8 520 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TNIP3Q96KP6 325 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PHACTR1Q9C0D0 580 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SLC24A2Q9UI40 661 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 FNDC1Q4ZHG4 1894 aaPredicted RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 NLRC5Q86WI3 1866 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SIGLEC16A6NMB1 481 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 ALOX15BO15296 676 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 DCTN3O75935 186 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 GCAP28676 217 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TKTP29401 623 aaKnown RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 ALDH3A1P30838 453 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 BRCC3P46736 316 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TUSC3Q13454 348 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PDK4Q16654 411 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SLC24A5Q71RS6 500 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 AGGF1Q8N302 714 aaeCLIP13.79□□□□□ -0.2
A1CF-204ENST00000373997 ANKLE1Q8NAG6 615 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 MCRS1Q96EZ8 462 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 SLITRK1Q96PX8 696 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SMC6Q96SB8 1091 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 DNAI2Q9GZS0 605 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 LRMDAQ9H2I8 198 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 DDX43Q9NXZ2 648 aaKnown RBP13.79□□□□□ -0.2
A1CF-204ENST00000373997 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 ZNF148Q9UQR1 794 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 L3MBTL1Q9Y468 752 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 VWA8A3KMH1 1905 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 TTC3P53804 2025 aa13.79□□□□□ -0.2
A1CF-204ENST00000373997 GRAP2O75791 330 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 B3GAT3O94766 335 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 KRT1P04264 644 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 CCNG1P51959 295 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 BCAT1P54687 386 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 BST2Q10589 180 aaKnown RBP13.78□□□□□ -0.2
A1CF-204ENST00000373997 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 CLLU1OSQ5K130 101 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 ZFYVE27Q5T4F4 411 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 INPP5DQ92835 1189 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
A1CF-204ENST00000373997 TMEM237Q96Q45 408 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 DNPEPQ9ULA0 475 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 F8W810 466 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 CLDN5O00501 218 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
A1CF-204ENST00000373997 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 ARSEP51690 589 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
A1CF-204ENST00000373997 PIGHQ14442 188 aaPredicted RBP13.78□□□□□ -0.2
A1CF-204ENST00000373997 KIAA0319Q5VV43 1072 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
A1CF-204ENST00000373997 CENPUQ71F23 418 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms