RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CTSHP09668 335 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 TFE3P19532 575 aaPredicted RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 IL4RP24394 825 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 TKTP29401 623 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 FLT3LGP49771 235 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 BCAT1P54687 386 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 MRPS35P82673 323 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 SPATA21Q7Z572 469 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 ARHGAP22Q7Z5H3 698 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 APLFQ8IW19 511 aaPredicted RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 FAM172AQ8WUF8 416 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 PRMT1Q99873 361 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
GPC3-201ENST00000370818 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 SCN10AQ9Y5Y9 1956 aa13.33□□□□□ -0.28
GPC3-201ENST00000370818 SDC4P31431 198 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 HDAC4P56524 1084 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 CAP1Q01518 475 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 MORF4L2Q15014 288 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 PLCD4Q9BRC7 762 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 C11orf84Q9BUA3 381 aaPredicted RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 NKX1-2Q9UD57 310 aaPredicted RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 HUS1O60921 280 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 OAS1P00973 400 aaKnown RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 MAGEA4P43358 317 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 FCGRTP55899 365 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 FASTKD3Q14CZ7 662 aaKnown RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 MFSD14CQ5VZR4 134 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 SELENOSQ9BQE4 189 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 INTS9Q9NV88 658 aaKnown RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
GPC3-201ENST00000370818 CTNNAL1Q9UBT7 734 aa13.32□□□□□ -0.28
GPC3-201ENST00000370818 M0QZ92 97 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 TCEA3O75764 348 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 WARSP23381 471 aaKnown RBP13.31□□□□□ -0.28
GPC3-201ENST00000370818 ALDH3A1P30838 453 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 MLH1P40692 756 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 RANBP1P43487 201 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SNX16P57768 344 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 EIF3EP60228 445 aaKnown RBP13.31□□□□□ -0.28
GPC3-201ENST00000370818 CA9Q16790 459 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 BOLA3Q53S33 107 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SCYL2Q6P3W7 929 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SERINC5Q86VE9 423 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 B3GALNT2Q8NCR0 500 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 TRIM33Q9UPN9 1127 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SHOC2Q9UQ13 582 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 HTTP42858 3142 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SEPT4O43236 478 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 WFS1O76024 890 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 RBP3P10745 1247 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 PYGBP11216 843 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 LCP1P13796 627 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
GPC3-201ENST00000370818 NRLP54845 237 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 NKX3-2P78367 333 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 FAM71DQ8N9W8 422 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 RNF157Q96PX1 679 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
GPC3-201ENST00000370818 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
GPC3-201ENST00000370818 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
GPC3-201ENST00000370818 CYB561D2O14569 222 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 MCF2LO15068 1137 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 RARBP10826 455 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PTPN9P43378 593 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 GAD2Q05329 585 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PRKCZQ05513 592 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 MGAT3Q09327 533 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 USP4Q13107 963 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 NOMO1Q15155 1222 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 FAM47CQ5HY64 1035 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ANKRD22Q5VYY1 191 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 CYP4F22Q6NT55 531 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 LMNTD2Q8IXW0 634 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PQLC3Q8N755 202 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms