RNA–Protein interactions for RNA: ENST00000370794.7

USP33-204, Transcript of ubiquitin specific peptidase 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP33, Length 4,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-204ENST00000370794 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MTFR1Q15390 333 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 EPS8L1Q8TE68 723 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MCUR1Q96AQ8 359 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TLR10Q9BXR5 811 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
USP33-204ENST00000370794 RALBP11234 206 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TYK2P29597 1187 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 CLCNKBP51801 687 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 TFDP3Q5H9I0 405 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 GPR152Q8TDT2 470 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 ARL8AQ96BM9 186 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
USP33-204ENST00000370794 DNM1LO00429 736 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 PJA2O43164 708 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 SLC8A1P32418 973 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SMAD3P84022 425 aaKnown RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 TRIM51Q9BSJ1 452 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 C11orf84Q9BUA3 381 aaPredicted RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 FZD8Q9H461 694 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 LATS2Q9NRM7 1088 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 DDX3XO00571 662 aaKnown RBP eCLIP13.08□□□□□ -0.322e-12■■■■■ 42.8
USP33-204ENST00000370794 CHEK2O96017 543 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 NOS2P35228 1153 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 PMS2P54278 862 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 BLOC1S5Q8TDH9 187 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SHC3Q92529 594 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 ZC3H7BQ9UGR2 993 aaKnown RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 GJB6O95452 261 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 ACADMP11310 421 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SCNN1BP51168 640 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 NAA25Q14CX7 972 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SYDE1Q6ZW31 735 aaPredicted RBP13.08□□□□□ -0.32
USP33-204ENST00000370794 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 SNX19Q92543 992 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 CAVIN3Q969G5 261 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 TBCBQ99426 244 aa13.08□□□□□ -0.32
USP33-204ENST00000370794 GEMIN4P57678 1058 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 MTA1Q13330 715 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP33-204ENST00000370794 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 CASKIN2Q8WXE0 1202 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 WNT8BQ93098 351 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 TKTL2Q9H0I9 626 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 WRAP73Q9P2S5 460 aaPredicted RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 INSL6Q9Y581 213 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 RASA4BC9J798 803 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 ZNF263O14978 683 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 RASA4O43374 803 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 RARGP13631 454 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 PBX3P40426 434 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 TM4SF4P48230 202 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 PSEN1P49768 467 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 STX1BP61266 288 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 ZC3H12AQ5D1E8 599 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 FAM228AQ86W67 206 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 C3orf20Q8ND61 904 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 TTC17Q96AE7 1141 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 PTPN18Q99952 460 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.324e-7■■■■■ 38
USP33-204ENST00000370794 XPO7Q9UIA9 1087 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 CRLS1Q9UJA2 301 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 DNMT3LQ9UJW3 386 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 OPLAHO14841 1288 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 TLR5O60602 858 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 CIB2O75838 187 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 GLI1P08151 1106 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 FECHP22830 423 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 HNRNPH3P31942 346 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 MFN1Q8IWA4 741 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 SRRM1Q8IYB3 904 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 CCNYL1Q8N7R7 359 aa13.07□□□□□ -0.32
USP33-204ENST00000370794 ZNF473Q8WTR7 871 aaKnown RBP13.07□□□□□ -0.32
USP33-204ENST00000370794 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms