RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 LMO2P25791 158 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 CNR2P34972 360 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 AVPR1AP37288 418 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 ASIC1P78348 528 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 RUNX3Q13761 415 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 KCNJ12Q14500 433 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 PSMD6Q15008 389 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 PON2Q15165 354 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 MEA1Q16626 185 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 FIGNQ5HY92 759 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 TMEM196Q5HYL7 178 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 SDHAF4Q5VUM1 108 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 VSTM1Q6UX27 236 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 Q6ZS52 159 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 TRIM58Q8NG06 486 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 JAKMIP2Q96AA8 810 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 CABS1Q96KC9 395 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 CRTAC1Q9NQ79 661 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
LMO4-201ENST00000370542 MAGEC2Q9UBF1 373 aaPredicted RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 ZNF638Q14966 1978 aaKnown RBP15.73■□□□□ 0.11
LMO4-201ENST00000370542 GCN1Q92616 2671 aaKnown RBP15.72■□□□□ 0.11
LMO4-201ENST00000370542 LGALS16A8MUM7 142 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 PFKLP17858 780 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 GGCXP38435 758 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 MNAT1P51948 309 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 CYP24A1Q07973 514 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 MAPRE1Q15691 268 aaKnown RBP15.72■□□□□ 0.11
LMO4-201ENST00000370542 ZNF77Q15935 545 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 SPATA2LQ8IUW3 424 aaPredicted RBP15.72■□□□□ 0.11
LMO4-201ENST00000370542 XXYLT1Q8NBI6 393 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 STKLD1Q8NE28 680 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 BCAS4Q8TDM0 211 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 SYT15Q9BQS2 421 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 C2orf42Q9NWW7 574 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 GUCA1BQ9UMX6 200 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 CTNND2Q9UQB3 1225 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 NME7Q9Y5B8 376 aa15.72■□□□□ 0.11
LMO4-201ENST00000370542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 A0A1W2PQJ5 194 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 LRP3O75074 770 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 ATP2C2O75185 946 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 CCDC172P0C7W6 258 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 HNRNPH1P31943 449 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 CCT5P48643 541 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 CLDN10P78369 228 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 UBXN1Q04323 297 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 USP4Q13107 963 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 KCNB1Q14721 858 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 PDGFRLQ15198 375 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 HSP90AA4PQ58FG1 418 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 KLHL10Q6JEL2 608 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 LONP2Q86WA8 852 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 ARFGAP2Q8N6H7 521 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 OTUD6BQ8N6M0 293 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 KIAA1958Q8N8K9 716 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 EIF1ADQ8N9N8 165 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 TTC8Q8TAM2 541 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 ZNF516Q92618 1163 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 SLC22A12Q96S37 553 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 XYLT2Q9H1B5 865 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 VRTNQ9H8Y1 702 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 ACTR5Q9H9F9 607 aaPredicted RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 ZMIZ1Q9ULJ6 1067 aa15.71■□□□□ 0.11
LMO4-201ENST00000370542 MAGED2Q9UNF1 606 aaPredicted RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 FLNBO75369 2602 aaKnown RBP15.71■□□□□ 0.11
LMO4-201ENST00000370542 CCDC163A0A0D9SF12 145 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 CHURC1-FNTBB4DL54 471 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 CLIC2O15247 247 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 HRO43593 1189 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 KLRC4O43908 158 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
LMO4-201ENST00000370542 CASP1P29466 404 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 GNGT1P63211 74 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 ZBED6P86452 979 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 SPEM2Q0P670 501 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 KIF5AQ12840 1032 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 SPA17Q15506 151 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 KNOP1Q1ED39 458 aaKnown RBP15.7■□□□□ 0.1
LMO4-201ENST00000370542 TRIM68Q6AZZ1 485 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 LAIR1Q6GTX8 287 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 FSTL4Q6MZW2 842 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 HS2ST1Q7LGA3 356 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 P3H4Q92791 437 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 MYLPFQ96A32 169 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 PCED1BQ96HM7 432 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 ALS2CR12Q96Q35 445 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 EBF3Q9H4W6 596 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 CXorf56Q9H5V9 222 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 DMAC2Q9NW81 257 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms