RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TBX20Q9UMR3 447 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 DEFB107AQ8IZN7 70 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ING3Q9NXR8 418 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF609O15014 1411 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 FLT1P17948 1338 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 A0A1W2PRG6 482 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 O00370 1275 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 ATP6V1G2O95670 118 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 STAU1O95793 577 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 THOC7Q6I9Y2 204 aaKnown RBP12.81□□□□□ -0.36
HCFC1-202ENST00000369984 LPAR1Q92633 364 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 CLPBQ9H078 707 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
HCFC1-202ENST00000369984 MED26O95402 600 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NPTXRO95502 500 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 FASP25445 335 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 TRMT5Q32P41 509 aaKnown RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SLC22A9Q8IVM8 553 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 TMBIM4Q9HC24 238 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 DNAJC16Q9Y2G8 782 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 RAD54BQ9Y620 910 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 FKBP6O75344 327 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ABCB1P08183 1280 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 MYL12AP19105 171 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 GRK4P32298 578 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SLC1A6P48664 564 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NT5DC4Q86YG4 428 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 P4HA2O15460 535 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ECDO95905 644 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PON1P27169 355 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 HNMTP50135 292 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NEDD1Q8NHV4 660 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 GH1P01241 217 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PDHBP11177 359 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ITGA3P26006 1051 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PPP2R1BP30154 601 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ARHGAP15Q53QZ3 475 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SPANXN2Q5MJ10 180 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 GLB1LQ6UWU2 654 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SLFN11Q7Z7L1 901 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 FIG4Q92562 907 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PDGFCQ9NRA1 345 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZNF624Q9P2J8 865 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SLCO1B7G3V0H7 640 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 AGKQ53H12 422 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZSWIM1Q9BR11 485 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 TEX13BQ9BXU2 312 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 EFCAB10A6NFE3 127 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 C6orf222P0C671 652 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ERVK-10P10266 1014 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SLC11A2P49281 568 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 GEMP55040 296 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NRG3P56975 720 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ZCCHC8Q6NZY4 707 aaKnown RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 VPS33AQ96AX1 596 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 SEPHS2Q99611 448 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NCKIPSDQ9NZQ3 722 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 DYRK1BQ9Y463 629 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PCDHGA3Q9Y5H0 932 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 MEI4A8MW99 385 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 PSMD12O00232 456 aaPredicted RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 TBX3O15119 743 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ATG7O95352 703 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 NEDD8Q15843 81 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 CAPSLQ8WWF8 208 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ARMC7Q9H6L4 198 aa12.8□□□□□ -0.36
HCFC1-202ENST00000369984 DDX18Q9NVP1 670 aaKnown RBP12.8□□□□□ -0.36
HCFC1-202ENST00000369984 ERN1O75460 977 aaKnown RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ALOX12P18054 663 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 FOXO4P98177 505 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 TRAPPC9Q96Q05 1148 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 MLPHQ9BV36 600 aaPredicted RBP12.79□□□□□ -0.36
HCFC1-202ENST00000369984 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 RAD23AP54725 363 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 ARHGAP22Q7Z5H3 698 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 SYTL1Q8IYJ3 562 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 KYQ8NBH2 561 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 MAGED4Q96JG8 741 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
HCFC1-202ENST00000369984 STN1Q9H668 368 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms