RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PALLDQ8WX93 1383 aa10.74□□□□□ -0.69
PRDM1-201ENST00000369089 ISPDA4D126 451 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 FDPSP14324 419 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TECP42680 631 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TRAP1Q12931 704 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 DLG1Q12959 904 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PTK7Q13308 1070 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 C6orf52Q5T4I8 152 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 DENND5AQ6IQ26 1287 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 OTOAQ7RTW8 1153 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CAND1Q86VP6 1230 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 BBS7Q8IWZ6 715 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ZFP28Q8NHY6 868 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ZNF486Q96H40 463 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 HEMGNQ9BXL5 484 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TRIM8Q9BZR9 551 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 SLC6A15Q9H2J7 730 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 FANCFQ9NPI8 374 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PRR23D1E9PI22 279 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PRR23D2P0DMB1 279 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ME2P23368 584 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PSMA4P25789 261 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 GNL1P36915 607 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 RPL21P46778 160 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 DRG2P55039 364 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CYP4A11Q02928 519 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CENPCQ03188 943 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 EPS8Q12929 822 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CYP4A22Q5TCH4 519 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 SULT1C3Q6IMI6 304 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 LAYNQ6UX15 382 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 LSM14AQ8ND56 463 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 HM13Q8TCT9 377 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CIDECQ96AQ7 238 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CALN1Q9BXU9 219 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 HESX1Q9UBX0 185 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 SRP68Q9UHB9 627 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CDY2AQ9Y6F7 541 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CDY1Q9Y6F8 540 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 NRKQ7Z2Y5 1582 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TECPR2O15040 1411 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 A0A087X0T9 212 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 FADS2P1A8MWK0 482 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 GAP43P17677 238 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PRKCQQ04759 706 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ANGPT1Q15389 498 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TAB1Q15750 504 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 RAB43Q86YS6 212 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CAMK1DQ8IU85 385 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 FAM47BQ8NA70 645 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 ZSWIM2Q8NEG5 633 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PPP1R10Q96QC0 940 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 HGH1Q9BTY7 390 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 VPS11Q9H270 941 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 MPP6Q9NZW5 540 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CPSF3Q9UKF6 684 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 DGKIO75912 1065 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TOMM70O94826 608 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 S100A6P06703 90 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 GTF2H1P32780 548 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 EIF3EP60228 445 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 TAGLNQ01995 201 aaKnown RBP10.73□□□□□ -0.69
PRDM1-201ENST00000369089 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 FRMD7Q6ZUT3 714 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 NUDT12Q9BQG2 462 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 RMND5AQ9H871 391 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 MAGEE1Q9HCI5 957 aa10.73□□□□□ -0.69
PRDM1-201ENST00000369089 KANSL1LA0AUZ9 987 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 TPST1O60507 370 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 LRRN2O75325 713 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NELFEP18615 380 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 GARTP22102 1010 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 PBX1P40424 430 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SEPHS1P49903 392 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NPEPPSP55786 919 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 POU5F1Q01860 360 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 COX10Q12887 443 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 C12orf56Q8IXR9 622 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 NLGN1Q8N2Q7 840 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 FBXL13Q8NEE6 735 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 POMGNT1Q8WZA1 660 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 ATP6V1E2Q96A05 226 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 DMRTB1Q96MA1 342 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 TMEM246Q9BRR3 403 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 STXBP5LQ9Y2K9 1186 aa10.72□□□□□ -0.69
PRDM1-201ENST00000369089 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
PRDM1-201ENST00000369089 SRP72O76094 671 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms