RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 MCF2LO15068 1137 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 EXTL3O43909 919 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 TRMUO75648 421 aaKnown RBP10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 PDE5AO76074 875 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 CRTAMO95727 393 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ITGB5P18084 799 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 YWHAZP63104 245 aaKnown RBP10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ZFP1Q6P2D0 407 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 DHRS4L2Q6PKH6 230 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 UBR7Q8N806 425 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 TRPC4APQ8TEL6 797 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 LRRC39Q96DD0 335 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ZNF778Q96MU6 729 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 C20orf27Q9GZN8 174 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 UBAP1Q9NZ09 502 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 ZNHIT2Q9UHR6 403 aa10.89□□□□□ -0.67
LYSMD1-201ENST00000368908 CENPFP49454 3210 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CCDC160A6NGH7 325 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 DDTLA6NHG4 134 aaPredicted RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 G3V3G9 751 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 VNN1O95497 513 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 PROCP04070 461 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CAPNS1P04632 268 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 KDELR1P24390 212 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CNTFP26441 200 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CDH5P33151 784 aaPredicted RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 GABRB2P47870 512 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CD97P48960 835 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 EIF3EP60228 445 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 MYBPC1Q00872 1141 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 ADGRE1Q14246 886 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 CNGA3Q16281 694 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 HADHQ16836 314 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 TEDDM1Q5T9Z0 273 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 ERI1Q8IV48 349 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 FNIP1Q8TF40 1166 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 ZNF606Q8WXB4 792 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 ZDHHC15Q96MV8 337 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 BIRC8Q96P09 236 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 GRIP2Q9C0E4 1043 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 POPDC2Q9HBU9 364 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 AGO4Q9HCK5 861 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 KCNH7Q9NS40 1196 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 FAIMQ9NVQ4 179 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 PRPF19Q9UMS4 504 aaKnown RBP10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 DNAJC16Q9Y2G8 782 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 WDR37Q9Y2I8 494 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 AP4B1Q9Y6B7 739 aa10.88□□□□□ -0.67
LYSMD1-201ENST00000368908 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 TMEM221A6NGB7 291 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 E9PBE3 544 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 CYB561D2O14569 222 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 FAM58BPP0C7Q3 252 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 IDO1P14902 403 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 SLC5A2P31639 672 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 MAGEA6P43360 314 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 HDAC4P56524 1084 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 RAB15P59190 212 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 DYNLT1P63172 113 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 LPIN1Q14693 890 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 MBLAC2Q68D91 279 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 DUS1LQ6P1R4 473 aaKnown RBP10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 CTAGE3PQ8IX95 158 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 DEFB107AQ8IZN7 70 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 BBS5Q8N3I7 341 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 FAM71DQ8N9W8 422 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 TMEM35BQ8NCS4 154 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 CFAP36Q96G28 342 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 FAM213AQ9BRX8 229 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 RTKNQ9BST9 563 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 DDX18Q9NVP1 670 aaKnown RBP10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 ARHGAP28Q9P2N2 729 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 BCAP29Q9UHQ4 241 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 ARHGAP26Q9UNA1 814 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 AK5Q9Y6K8 562 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 COL2A1P02458 1487 aaPredicted RBP10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 H0YCG3 227 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 PLA2G6O60733 806 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 FBXO21O94952 628 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 HNRNPCP07910 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 SRGAP2CP0DJJ0 459 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 SCNN1DP51172 638 aa10.87□□□□□ -0.67
LYSMD1-201ENST00000368908 GALK1P51570 392 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms