RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ATG16L2Q8NAA4 619 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 FAR2Q96K12 515 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 STARD7Q9NQZ5 370 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 TMCC3Q9ULS5 477 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 AAR2Q9Y312 384 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 GLP2RO95838 553 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 GTF2E2P29084 291 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 C9orf131Q5VYM1 1079 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 TPGS1Q6ZTW0 290 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 GPR141Q7Z602 305 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 STMN3Q9NZ72 180 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 O00370 1275 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 THP07101 528 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 FDPSP14324 419 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 NOS3P29474 1203 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX27-202ENST00000368841 IL5RAQ01344 420 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 DNAJC14Q6Y2X3 702 aaPredicted RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 KCND2Q9NZV8 630 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 TMC7Q7Z402 723 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 CASP10Q92851 521 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 MARK4Q96L34 752 aa18.68■□□□□ 0.58
SNX27-202ENST00000368841 SPRTNQ9H040 489 aaPredicted RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 MRPL39Q9NYK5 338 aaKnown RBP18.68■□□□□ 0.58
SNX27-202ENST00000368841 TBX3O15119 743 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 GRK3P35626 688 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 ADIGQ0VDE8 80 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 COX10Q12887 443 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 MMGT1Q8N4V1 131 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 RDM1Q8NG50 284 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 ANKS1AQ92625 1134 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 KLF15Q9UIH9 416 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 IQCMA0A1B0GVH7 501 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 NTSR2O95665 410 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 ZNF34Q8IZ26 560 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 NMD3Q96D46 503 aaKnown RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 FAM153AQ9UHL3 310 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 DCDC2CA8MYV0 355 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 PSTPIP1O43586 416 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 FAM20BO75063 409 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 FGFR3P22607 806 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 SOX6P35712 828 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 KRT20P35900 424 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 LLGL2Q6P1M3 1020 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNX27-202ENST00000368841 TATDN2Q93075 761 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 AHCYL2Q96HN2 611 aaKnown RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 PSMD12O00232 456 aaPredicted RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 HNRNPRO43390 633 aaKnown RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 GLRA3O75311 464 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 EPHX4Q8IUS5 362 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 SDR42E2A6NKP2 422 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 SUPT20HL2P0C7V6 817 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 TMED10P49755 219 aaKnown RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 CBWD3Q5JTY5 395 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 CBWD5Q5RIA9 395 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 ZSCAN18Q8TBC5 510 aaPredicted RBP18.67■□□□□ 0.58
SNX27-202ENST00000368841 CLIP3Q96DZ5 547 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 PAFAH2Q99487 392 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 PXMP2Q9NR77 195 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 PLA2G4CQ9UP65 541 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 ALKQ9UM73 1620 aa18.67■□□□□ 0.58
SNX27-202ENST00000368841 PIPSLA2A3N6 862 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 CCT8P50990 548 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 PLD1Q13393 1074 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 LRRN4Q8WUT4 740 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 IPCEF1Q8WWN9 437 aaPredicted RBP18.66■□□□□ 0.58
SNX27-202ENST00000368841 A0A087X0T9 212 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 FAM228BP0C875 321 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 CCR4P51679 360 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 NFIAQ12857 509 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 AGKQ53H12 422 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 ZNF677Q86XU0 584 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 LAMTOR4Q0VGL1 99 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 NR6A1Q15406 480 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
SNX27-202ENST00000368841 SEL1L3Q68CR1 1132 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 C11orf88Q6PI97 169 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 NLRP9Q7RTR0 991 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 RXFP2Q8WXD0 754 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 PPP1R2P1Q96PQ5 205 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 VTA1Q9NP79 307 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 DYRK3O43781 588 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 CCND1P24385 295 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 RALGDSQ12967 914 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 TRPM5Q9NZQ8 1165 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 FBXL21Q9UKT6 434 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 GMFGO60234 142 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 CYP11B2P19099 503 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 UTS2BQ765I0 119 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 RNF148Q8N7C7 305 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 PIK3R5Q8WYR1 880 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 NOD2Q9HC29 1040 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 IL1RAPL1Q9NZN1 696 aa18.66■□□□□ 0.58
SNX27-202ENST00000368841 A0A1W2PQJ5 194 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms