RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PEAR1Q5VY43 1037 aaPredicted RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 CCDC186Q7Z3E2 898 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 SYT12Q8IV01 421 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 PGBD3Q8N328 593 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 XPO6Q96QU8 1125 aaKnown RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 BBS2Q9BXC9 721 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 CD248Q9HCU0 757 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 TMEM74BQ9NUR3 256 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 DNAJC17Q9NVM6 304 aaKnown RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 LSM7Q9UK45 103 aaKnown RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
CKS1B-202ENST00000368436 USP3Q9Y6I4 520 aa16.88■□□□□ 0.29
CKS1B-202ENST00000368436 A0A1W2PQ27 194 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 A0A1W2PQ64 194 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 A0A1W2PQF6 199 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 CISD3P0C7P0 127 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 HOXB2P14652 356 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 TYRP14679 529 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 CSRP1P21291 193 aaKnown RBP16.87■□□□□ 0.29
CKS1B-202ENST00000368436 GTF2H1P32780 548 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 DPP6P42658 865 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 PSEN1P49768 467 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 NOVA1P51513 510 aaKnown RBP16.87■□□□□ 0.29
CKS1B-202ENST00000368436 ADAM9Q13443 819 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 PPP1R26Q5T8A7 1209 aaPredicted RBP16.87■□□□□ 0.29
CKS1B-202ENST00000368436 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 Q6ZNB5 142 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 KRBA2Q6ZNG9 492 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 SCD5Q86SK9 330 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 JAKMIP2Q96AA8 810 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 FAXDC2Q96IV6 333 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 DUSP16Q9BY84 665 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 DNAI2Q9GZS0 605 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 DNMT3LQ9UJW3 386 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 PILRBQ9UKJ0 227 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 NUDT5Q9UKK9 219 aa16.87■□□□□ 0.29
CKS1B-202ENST00000368436 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 GIPC1O14908 333 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 MDM4O15151 490 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 CEACAM1P13688 526 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 CD58P19256 250 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 HOXD12P35452 270 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 LMAN2Q12907 356 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 TRIM61Q5EBN2 209 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 C10orf120Q5SQS8 335 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 SH3PXD2AQ5TCZ1 1133 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 KRT39Q6A163 491 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 SLC23A3Q6PIS1 610 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 SLC36A4Q6YBV0 504 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 TPGS1Q6ZTW0 290 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 TOGARAM2Q6ZUX3 1019 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 ACOX2Q99424 681 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 GABRG3Q99928 467 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 CLIC5Q9NZA1 410 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 FBXO10Q9UK96 956 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 ADAMTS9Q9P2N4 1935 aa16.86■□□□□ 0.29
CKS1B-202ENST00000368436 ASCC3Q8N3C0 2202 aaKnown RBP16.85■□□□□ 0.29
CKS1B-202ENST00000368436 STC2O76061 302 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 WASP42768 502 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 LYSMD4Q5XG99 296 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 SDE2Q6IQ49 451 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 TADA2BQ86TJ2 420 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 CHPFQ8IZ52 775 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 TTC39CQ8N584 583 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 IPO4Q8TEX9 1081 aaKnown RBP16.85■□□□□ 0.29
CKS1B-202ENST00000368436 SEMA4DQ92854 862 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 P2RY11Q96G91 374 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 NUSAP1Q9BXS6 441 aaKnown RBP16.85■□□□□ 0.29
CKS1B-202ENST00000368436 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 SCAND2PQ9GZW5 306 aaPredicted RBP16.85■□□□□ 0.29
CKS1B-202ENST00000368436 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 MMRN2Q9H8L6 949 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 NAGPAQ9UK23 515 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 GON4LQ3T8J9 2241 aa16.85■□□□□ 0.29
CKS1B-202ENST00000368436 USP24Q9UPU5 2620 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 IGHV1OR15-9A0A0B4J2B8 117 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 GFRA2O00451 464 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 AP5Z1O43299 807 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 ZNF202O95125 648 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 KLKB1P03952 638 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 RALAP11233 206 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 ITPKAP23677 461 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 DGKGP49619 791 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 HEXIM2Q96MH2 286 aaKnown RBP16.84■□□□□ 0.29
CKS1B-202ENST00000368436 CDK5RAP1Q96SZ6 601 aaKnown RBP16.84■□□□□ 0.29
CKS1B-202ENST00000368436 FAM124BQ9H5Z6 455 aaPredicted RBP16.84■□□□□ 0.29
CKS1B-202ENST00000368436 CISHQ9NSE2 258 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 RAB20Q9NX57 234 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 WASF3Q9UPY6 502 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 ZNF510Q9Y2H8 683 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 PCDH15Q96QU1 1955 aa16.84■□□□□ 0.29
CKS1B-202ENST00000368436 ZNF217O75362 1048 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms