RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 BCLAF3A2AJT9 711 aaKnown RBP18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 CFAP69A5D8W1 941 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 DPYSL4O14531 572 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 L1CAMP32004 1257 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 SLC18A2Q05940 514 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 ZNF618Q5T7W0 954 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 TRMT10BQ6PF06 316 aaKnown RBP18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 TTC39CQ8N584 583 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 TEKT4Q8WW24 435 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 OSMRQ99650 979 aa18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 IQCGQ9H095 443 aaKnown RBP18.77■□□□□ 0.6
UBQLN4-201ENST00000368309 TRIP11Q15643 1979 aa18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 COPEO14579 308 aa18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 SMPD1P17405 629 aa18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 PYROXD2Q8N2H3 581 aa18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 PRR11Q96HE9 360 aaPredicted RBP18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 NXF3Q9H4D5 531 aaKnown RBP18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 VTA1Q9NP79 307 aa18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 FBXO6Q9NRD1 293 aaPredicted RBP18.77■□□□□ 0.59
UBQLN4-201ENST00000368309 SLC15A5A6NIM6 579 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 A6NJR5 290 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 DHRS4L1P0CG22 281 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 SNAPC2Q13487 334 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 TTC39BQ5VTQ0 682 aaPredicted RBP18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 KIRREL3Q8IZU9 778 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 RTP4Q96DX8 246 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 TBCBQ99426 244 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 NOP53Q9NZM5 478 aaKnown RBP18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 SPAG6O75602 509 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 SERPINB4P48594 390 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 KCNT2Q6UVM3 1135 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 UNC5AQ6ZN44 842 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 NT5DC4Q86YG4 428 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 CCDC185Q8N715 623 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 FAM13CQ8NE31 585 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 KCNV2Q8TDN2 545 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 ZNF670Q9BS34 389 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 PIH1D1Q9NWS0 290 aaKnown RBP18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 NKX1-2Q9UD57 310 aaPredicted RBP18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 ARFIP2P53365 341 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 DPP9Q86TI2 863 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 C15orf41Q9Y2V0 281 aa18.76■□□□□ 0.59
UBQLN4-201ENST00000368309 MDM4O15151 490 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SNRPAP09012 282 aaKnown RBP18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 AMPD1P23109 780 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 ZBTB16Q05516 673 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 PARP6Q2NL67 630 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 MROH9Q5TGP6 573 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 VPS52Q8N1B4 723 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SLC10A4Q96EP9 437 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 TRIM6Q9C030 488 aaPredicted RBP18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 KCNK13Q9HB14 408 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 AP4E1Q9UPM8 1137 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 CYB561D2O14569 222 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 KRT37O76014 449 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SERPINB3P29508 390 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 PRKD1Q15139 912 aaPredicted RBP18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SMAD1Q15797 465 aaKnown RBP18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 CTC1Q2NKJ3 1217 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SNX27Q96L92 541 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 ZNF395Q9H8N7 513 aaPredicted RBP18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 ZNF408Q9H9D4 720 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 CITO14578 2027 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 CSH1P0DML2 217 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 CSH2P0DML3 217 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 DESP17661 470 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 GM2AP17900 193 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 ELF1P32519 619 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 ARMC2Q8NEN0 867 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 BEST2Q8NFU1 509 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 INPP5DQ92835 1189 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 TMEM120AQ9BXJ8 343 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 GOLGA2P5Q9HBQ8 144 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 MTMR10Q9NXD2 777 aa18.75■□□□□ 0.59
UBQLN4-201ENST00000368309 SYNJ2BP-COX16A0A087WUM0 186 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 PDHXO00330 501 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 RECQL4O94761 1208 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 CCNA1P78396 465 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 C9orf57Q5W0N0 161 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 TLDC1Q6P9B6 456 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 SLC27A1Q6PCB7 646 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 FAM131BQ86XD5 332 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 UNC5BQ8IZJ1 945 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 OR6J1Q8NGC5 347 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 KCTD15Q96SI1 283 aaPredicted RBP18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 ARL8BQ9NVJ2 186 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 COX16Q9P0S2 106 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 COL1A2P08123 1366 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 FAM237BA0A1B0GVD1 139 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 SPTLC1O15269 473 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 APOEP02649 317 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 MMP3P08254 477 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 GNL1P36915 607 aaPredicted RBP18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 RASSF2P50749 326 aa18.74■□□□□ 0.59
UBQLN4-201ENST00000368309 CRADDP78560 199 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms