RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SLC9A3R1O14745 358 aaPredicted RBP23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 PAPSS1O43252 624 aaPredicted RBP23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 NFATC1O95644 943 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 CHRNB1P11230 501 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 KRT9P35527 623 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 NUBP1P53384 320 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 PON2Q15165 354 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 NOP9Q86U38 636 aaKnown RBP23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 NEK11Q8NG66 645 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 EPS8L1Q8TE68 723 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 CPXM1Q96SM3 734 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 KCNH6Q9H252 994 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 ABCC13Q9NSE7 274 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 MARCH2Q9P0N8 246 aa23.5■■□□□ 1.35
ECHDC1-203ENST00000368291 GALR2O43603 387 aaPredicted RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 GFPT2O94808 682 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 CAVIN2O95810 425 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 LTFP02788 710 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 FYNP06241 537 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 SOX5P35711 763 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 TCF15Q12870 199 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 DHCR24Q15392 516 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 RHBDF2Q6PJF5 856 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 Q6ZNB5 142 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 RSRC2Q7L4I2 434 aaKnown RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 C1orf131Q8NDD1 294 aaKnown RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 OTUB2Q96DC9 234 aa23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 PCMTD1Q96MG8 357 aaPredicted RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 FBRSL1Q9HCM7 1045 aaKnown RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 OLA1Q9NTK5 396 aaKnown RBP23.49■■□□□ 1.35
ECHDC1-203ENST00000368291 TRDMT1O14717 391 aaKnown RBP23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 KLKB1P03952 638 aa23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 CDH5P33151 784 aaPredicted RBP23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 RPS9P46781 194 aaKnown RBP23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 TMEM196Q5HYL7 178 aa23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 MSANTD2Q6P1R3 559 aa23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 PIWIL1Q96J94 861 aaKnown RBP23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 LMAN1LQ9HAT1 526 aa23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 SFMBT1Q9UHJ3 866 aa23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 NOCTQ9UK39 431 aaKnown RBP23.48■■□□□ 1.35
ECHDC1-203ENST00000368291 NCAM2O15394 837 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 COG7P83436 770 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 NR1H3Q13133 447 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 CCINQ13939 588 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 PTPN20Q4JDL3 420 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 TAF3Q5VWG9 929 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 FSTL4Q6MZW2 842 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 PPP1R13BQ96KQ4 1090 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 SPAG5Q96R06 1193 aa23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 RBM12Q9NTZ6 932 aaKnown RBP23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 ARIH1Q9Y4X5 557 aaPredicted RBP23.47■■□□□ 1.35
ECHDC1-203ENST00000368291 SLC12A8A0AV02 714 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 HMBSP08397 361 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 MMEP08473 750 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 OPRD1P41143 372 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 GALK1P51570 392 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 GOLGA8FQ08AF8 430 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 GOLGA8DPQ0D2H9 430 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 NR1I3Q14994 352 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 LY6G5CQ5SRR4 150 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 FMNL3Q8IVF7 1028 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 RNF139Q8WU17 664 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 SLC20A1Q8WUM9 679 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 PRRX2Q99811 253 aa23.46■■□□□ 1.35
ECHDC1-203ENST00000368291 ERBB2P04626 1255 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 CHRNB2P17787 502 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 STAT1P42224 750 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 MAGEA9P43362 315 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 FANCCQ00597 558 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 GAS6Q14393 721 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 TRIP4Q15650 581 aaPredicted RBP23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 FILIP1LQ4L180 1135 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 TMEM25Q86YD3 366 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 EZH1Q92800 747 aaPredicted RBP23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 CHRDQ9H2X0 955 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 LSM7Q9UK45 103 aaKnown RBP23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 STRIP2Q9ULQ0 834 aa23.45■■□□□ 1.34
ECHDC1-203ENST00000368291 A0A1W2PQC6 194 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 SART1O43290 800 aaKnown RBP23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 MSI1O43347 362 aaKnown RBP23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 SERPINC1P01008 464 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 AMPD2Q01433 879 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 TAF5Q15542 800 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 LRSAM1Q6UWE0 723 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 C12orf40Q86WS4 652 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 ZNF677Q86XU0 584 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 TMEM35BQ8NCS4 154 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 CD101Q93033 1021 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 FAM149B1Q96BN6 582 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 P2RY13Q9BPV8 354 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 SPHK2Q9NRA0 654 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 NAALADL1Q9UQQ1 740 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 FANCMQ8IYD8 2048 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 CACNA1HO95180 2353 aa23.44■■□□□ 1.34
ECHDC1-203ENST00000368291 MYO18AQ92614 2054 aaKnown RBP23.43■■□□□ 1.34
ECHDC1-203ENST00000368291 ADH5P11766 374 aa23.43■■□□□ 1.34
ECHDC1-203ENST00000368291 NCAM1P13591 858 aa23.43■■□□□ 1.34
ECHDC1-203ENST00000368291 CORO1AP31146 461 aaKnown RBP23.43■■□□□ 1.34
ECHDC1-203ENST00000368291 TPM4P67936 248 aa23.43■■□□□ 1.34
ECHDC1-203ENST00000368291 FMO1Q01740 532 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms