RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CHRDQ9H2X0 955 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 LIMA1Q9UHB6 759 aaKnown RBP10.34□□□□□ -0.75
CD48-202ENST00000368046 FBXO4Q9UKT5 387 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 PTPRDP23468 1912 aa10.34□□□□□ -0.75
CD48-202ENST00000368046 ZDBF2Q9HCK1 2354 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 M0QYV0 167 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 THAP12O43422 761 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 GREM1O60565 184 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 FBXO21O94952 628 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 SP9P0CG40 484 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 CLCN1P35523 988 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 ACADSBP45954 432 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 CXCL12P48061 93 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 RGS7P49802 495 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 DAOAP59103 153 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 GAD2Q05329 585 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 ADIGQ0VDE8 80 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 MTAPQ13126 283 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 NCAPHQ15003 741 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 KLHL40Q2TBA0 621 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 ZNF528Q3MIS6 628 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 BSPRYQ5W0U4 402 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 CAVIN1Q6NZI2 390 aaKnown RBP10.33□□□□□ -0.76
CD48-202ENST00000368046 BHLHA9Q7RTU4 235 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 SPEM1Q8N4L4 309 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
CD48-202ENST00000368046 WBP2Q969T9 261 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 BPIFA3Q9BQP9 254 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 ACP6Q9NPH0 428 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 PLCB1Q9NQ66 1216 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 SPHK2Q9NRA0 654 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 OLA1Q9NTK5 396 aaKnown RBP10.33□□□□□ -0.76
CD48-202ENST00000368046 RBM12Q9NTZ6 932 aaKnown RBP10.33□□□□□ -0.76
CD48-202ENST00000368046 TAB2Q9NYJ8 693 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 LSM7Q9UK45 103 aaKnown RBP10.33□□□□□ -0.76
CD48-202ENST00000368046 STRIP2Q9ULQ0 834 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 ZNF510Q9Y2H8 683 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 GREB1Q4ZG55 1949 aa10.33□□□□□ -0.76
CD48-202ENST00000368046 NUP210Q8TEM1 1887 aaPredicted RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 A0A0A0MRY4 1105 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 E7ENQ6 273 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 MDM4O15151 490 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ATG13O75143 517 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ADH1CP00326 375 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 CYP17A1P05093 508 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 IRF1P10914 325 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 UCHL3P15374 230 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ZNF18P17022 549 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 KRT9P35527 623 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 EIF2DP41214 584 aaKnown RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 NBL1P41271 181 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 CCR3P51677 355 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 COPB1P53618 953 aaKnown RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 CSTF1Q05048 431 aaKnown RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 EFEMP1Q12805 493 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 GAS6Q14393 721 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 PPP2R5DQ14738 602 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 DRAP1Q14919 205 aaPredicted RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 SKOR2Q2VWA4 1001 aaPredicted RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 FBXO43Q4G163 708 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ANO6Q4KMQ2 910 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 LY6G5CQ5SRR4 150 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 FKBP15Q5T1M5 1219 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 DENND1BQ6P3S1 775 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 RSRC2Q7L4I2 434 aaKnown RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 TMEM110Q86TL2 294 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 TMEM25Q86YD3 366 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 MIB1Q86YT6 1006 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 BBS7Q8IWZ6 715 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 FAM71AQ8IYT1 594 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 WDTC1Q8N5D0 677 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 CCDC26Q8TAB7 109 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 RNF139Q8WU17 664 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 GOLGA1Q92805 767 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
CD48-202ENST00000368046 STK33Q9BYT3 514 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 DCLK3Q9C098 648 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 MIS12Q9H081 205 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 LHX5Q9H2C1 402 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ST7Q9NRC1 585 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 MARCH2Q9P0N8 246 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 RASAL2Q9UJF2 1139 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
CD48-202ENST00000368046 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 SLC12A8A0AV02 714 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 CHURC1-FNTBB4DL54 471 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 PIK3R2O00459 728 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
CD48-202ENST00000368046 STC2O76061 302 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 EGFP01133 1207 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms