RNA–Protein interactions for RNA: ENST00000367979.6

NR1I3-201, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-201ENST00000367979 MED15Q96RN5 788 aa13.47□□□□□ -0.25
NR1I3-201ENST00000367979 ACOX2Q99424 681 aa13.47□□□□□ -0.25
NR1I3-201ENST00000367979 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
NR1I3-201ENST00000367979 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
NR1I3-201ENST00000367979 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
NR1I3-201ENST00000367979 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 EPN2O95208 641 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 GRIA2P42262 883 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 RGS7P49802 495 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 BCAT1P54687 386 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 YWHAGP61981 247 aaKnown RBP eCLIP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 APBA1Q02410 837 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 C10orf76Q5T2E6 689 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 RASSF3Q86WH2 238 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 TRIM59Q8IWR1 403 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 TERB1Q8NA31 727 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 CLEC4CQ8WTT0 213 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 BBS2Q9BXC9 721 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 SRRTQ9BXP5 876 aaKnown RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 METTL14Q9HCE5 456 aaKnown RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 EBF1Q9UH73 591 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-201ENST00000367979 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
NR1I3-201ENST00000367979 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.26
NR1I3-201ENST00000367979 A0A0A0MRY4 1105 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 TCRBV21S2A2A0A5A6 115 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CACNG3O60359 315 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 RALAP11233 206 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 VDRP11473 427 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 LCP1P13796 627 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 PLA2G4AP47712 749 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 LMNB2Q03252 620 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 BST2Q10589 180 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 PUM1Q14671 1186 aaKnown RBP eCLIP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CSRP2Q16527 193 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 GRAMD4Q6IC98 578 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 TTC39CQ8N584 583 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 ZNF513Q8N8E2 541 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 EDEM1Q92611 657 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CNOT6LQ96LI5 555 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 SFMBT1Q9UHJ3 866 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CDV3Q9UKY7 258 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 CLEC4EQ9ULY5 219 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 RAD54BQ9Y620 910 aa13.45□□□□□ -0.26
NR1I3-201ENST00000367979 TNRC6BQ9UPQ9 1833 aaKnown RBP13.45□□□□□ -0.26
NR1I3-201ENST00000367979 SLC12A8A0AV02 714 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 YJEFN3A6XGL0 299 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.44□□□□□ -0.26
NR1I3-201ENST00000367979 E7ENQ6 273 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 M0QYV0 167 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 ZBED1O96006 694 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 TBXAS1P24557 533 aaPredicted RBP13.44□□□□□ -0.26
NR1I3-201ENST00000367979 GBP1P32455 592 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 MPLP40238 635 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 PSEN1P49768 467 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 ZNF132P52740 706 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 UBE2HP62256 183 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 PM20D1Q6GTS8 502 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 KIAA1211LQ6NV74 962 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 PMF1Q6P1K2 205 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 ERMP1Q7Z2K6 904 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 DENND1CQ8IV53 801 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 HMGB4Q8WW32 186 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 GTPBP4Q9BZE4 634 aaKnown RBP13.44□□□□□ -0.26
NR1I3-201ENST00000367979 UBXN6Q9BZV1 441 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 SLC6A17Q9H1V8 727 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 MARK1Q9P0L2 795 aa13.44□□□□□ -0.26
NR1I3-201ENST00000367979 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms