RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ODF2LQ9ULJ1 636 aa15.57■□□□□ 0.08
VAMP4-202ENST00000367740 STYXL1Q9Y6J8 313 aa15.57■□□□□ 0.08
VAMP4-202ENST00000367740 EPB41L2O43491 1005 aaKnown RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 NTRK1P04629 796 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 C1SP09871 688 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 CISD3P0C7P0 127 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 IRF1P10914 325 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 CDK4P11802 303 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 PLCG1P19174 1290 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 COPAP53621 1224 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 TFAMQ00059 246 aaKnown RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 COLEC12Q5KU26 742 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 TDRD10Q5VZ19 366 aaKnown RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 GATAD2AQ86YP4 633 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 TMPRSS6Q8IU80 811 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 SIPA1Q96FS4 1042 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 MED8Q96G25 268 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 CNDP2Q96KP4 475 aaKnown RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 XPO6Q96QU8 1125 aaKnown RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 BBS2Q9BXC9 721 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 IKZF4Q9H2S9 585 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 MARK1Q9P0L2 795 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.56■□□□□ 0.08
VAMP4-202ENST00000367740 MYO9AB2RTY4 2548 aa15.56■□□□□ 0.08
VAMP4-202ENST00000367740 GREM1O60565 184 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 TRAPPC10P48553 1259 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 DGKGP49619 791 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 ZNF131P52739 623 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 GTF2BQ00403 316 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 ENPP2Q13822 863 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 MAPRE1Q15691 268 aaKnown RBP15.55■□□□□ 0.08
VAMP4-202ENST00000367740 PRICKLE2Q7Z3G6 844 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 LIMS2Q7Z4I7 341 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 FAM124AQ86V42 546 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 ZNF248Q8NDW4 579 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 PRCCQ92733 491 aaPredicted RBP15.55■□□□□ 0.08
VAMP4-202ENST00000367740 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
VAMP4-202ENST00000367740 PLIN2Q99541 437 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 TRIM4Q9C037 500 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
VAMP4-202ENST00000367740 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 SIX4Q9UIU6 781 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 ITGA11Q9UKX5 1188 aa15.55■□□□□ 0.08
VAMP4-202ENST00000367740 A0A1B0GTQ1 180 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 LDOC1O95751 146 aaPredicted RBP15.54■□□□□ 0.08
VAMP4-202ENST00000367740 ZNF132P52740 706 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 UCNP55089 124 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 ORC1Q13415 861 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 HECTD3Q5T447 861 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 SLFN12LQ6IEE8 588 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 TPGS1Q6ZTW0 290 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 MYCT1Q8N699 235 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 PDZD8Q8NEN9 1154 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 MYCBPAPQ8TBZ2 947 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 OVCA2Q8WZ82 227 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 TSC1Q92574 1164 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 FBXO32Q969P5 355 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 IL17BQ9UHF5 180 aa15.54■□□□□ 0.08
VAMP4-202ENST00000367740 RELNP78509 3460 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 PTPRJQ12913 1337 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 KRT19P08727 400 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 ACADMP11310 421 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 YWHAQP27348 245 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 ADSSP30520 456 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 ACSL1P33121 698 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 PCBP4P57723 403 aaKnown RBP15.53■□□□□ 0.08
VAMP4-202ENST00000367740 MDH1BQ5I0G3 518 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 BROXQ5VW32 411 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 DPH6Q7L8W6 267 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 BRSK2Q8IWQ3 736 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 CSGALNACT2Q8N6G5 542 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 ZSWIM2Q8NEG5 633 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 SNRNP27Q8WVK2 155 aaKnown RBP15.53■□□□□ 0.08
VAMP4-202ENST00000367740 P2RY11Q96G91 374 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 HIC2Q96JB3 615 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 PARVGQ9HBI0 331 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 WDR35Q9P2L0 1181 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 THAP10Q9P2Z0 257 aaPredicted RBP15.53■□□□□ 0.08
VAMP4-202ENST00000367740 NXF1Q9UBU9 619 aaKnown RBP15.53■□□□□ 0.08
VAMP4-202ENST00000367740 NME7Q9Y5B8 376 aa15.53■□□□□ 0.08
VAMP4-202ENST00000367740 TEP1Q99973 2627 aaKnown RBP15.52■□□□□ 0.08
VAMP4-202ENST00000367740 LAD1O00515 517 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 FAM13AO94988 1023 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 PDGFRBP09619 1106 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 ACO1P21399 889 aaKnown RBP15.52■□□□□ 0.08
VAMP4-202ENST00000367740 PRPHP41219 470 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 TUBP50607 506 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 TOB1P50616 345 aaPredicted RBP15.52■□□□□ 0.08
VAMP4-202ENST00000367740 ST3GAL1Q11201 340 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 SHBQ15464 509 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 TMEM119Q4V9L6 283 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 LCE2DQ5TA82 110 aaPredicted RBP15.52■□□□□ 0.08
VAMP4-202ENST00000367740 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 HTR3DQ70Z44 454 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 KCTD17Q8N5Z5 321 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 POMGNT1Q8WZA1 660 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 BHMTQ93088 406 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 BIRC7Q96CA5 298 aa15.52■□□□□ 0.08
VAMP4-202ENST00000367740 ORAI3Q9BRQ5 295 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms