RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TBX4P57082 545 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 RRM2BQ7LG56 351 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 DNAAF5Q86Y56 855 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 SPATA16Q9BXB7 569 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 UBXN6Q9BZV1 441 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 C3P01024 1663 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 CARNS1A5YM72 827 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 MEFVO15553 781 aaPredicted RBP11.96□□□□□ -0.49
SYNE1-204ENST00000367248 TGM2P21980 687 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 BTKQ06187 659 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 ERAP2Q6P179 960 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 C11orf74Q86VG3 221 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 CEP41Q9BYV8 373 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 L2HGDHQ9H9P8 463 aa11.96□□□□□ -0.49
SYNE1-204ENST00000367248 MRPL40Q9NQ50 206 aaKnown RBP11.96□□□□□ -0.49
SYNE1-204ENST00000367248 C2orf81A6NN90 581 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 ACTRT1Q8TDG2 376 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 KAT5Q92993 513 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 SMYD3Q9H7B4 428 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 ST3GAL5Q9UNP4 418 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 NCKAP1Q9Y2A7 1128 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 NCAM2O15394 837 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 SPATA21Q7Z572 469 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 BRD8Q9H0E9 1235 aa11.96□□□□□ -0.5
SYNE1-204ENST00000367248 CAND2O75155 1236 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 CCNE2O96020 404 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 SLC29A2Q14542 456 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 GRAMD1BQ3KR37 738 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 HSDL1Q3SXM5 330 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 AARS2Q5JTZ9 985 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 SGF29Q96ES7 293 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 ASTN1O14525 1302 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 TRIM16O95361 564 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 NOL9Q5SY16 702 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 AGBL2Q5U5Z8 902 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 JADE3Q92613 823 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 TNFRSF25Q93038 417 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 RNPEPQ9H4A4 650 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 NFICP08651 508 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 E2F5Q15329 346 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 UGCGQ16739 394 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 LGI2Q8N0V4 545 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 RIBC1Q8N443 379 aaPredicted RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 OMDQ99983 421 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 ETNK1Q9HBU6 452 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 SDR42E2A6NKP2 422 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 AP5Z1O43299 807 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 RFC1P35251 1148 aaPredicted RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 MDH1P40925 334 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 HNRNPCL2B2RXH8 293 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 HNRNPCL1O60812 293 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 USP17L7P0C7H9 530 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 CHN1P15882 459 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 CYP2F1P24903 491 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 NAT16Q8N8M0 369 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 SUSD6Q92537 303 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 ULBP1Q9BZM6 244 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 PKD2L2Q9NZM6 624 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 LTFP02788 710 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 ASGR1P07306 291 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 PYGBP11216 843 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 EEF1B2P24534 225 aaKnown RBP11.95□□□□□ -0.5
SYNE1-204ENST00000367248 OR1E1P30953 314 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 TTLL9Q3SXZ7 439 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 NOMO2Q5JPE7 1267 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 AASDHPPTQ9NRN7 309 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 VAV3Q9UKW4 847 aa11.95□□□□□ -0.5
SYNE1-204ENST00000367248 ERVK-10P10266 1014 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 ITGALP20701 1170 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 SOAT1P35610 550 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 ACOX1Q15067 660 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 FBXO36Q8NEA4 188 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 GPR20Q99678 358 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 PABPC3Q9H361 631 aaKnown RBP11.94□□□□□ -0.5
SYNE1-204ENST00000367248 LRRC40Q9H9A6 602 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 ASAH2Q9NR71 780 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 B4GALT5O43286 388 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 MICAL2O94851 1124 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 RTN3O95197 1032 aaPredicted RBP11.94□□□□□ -0.5
SYNE1-204ENST00000367248 MYL2P10916 166 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 GEMIN4P57678 1058 aaKnown RBP11.94□□□□□ -0.5
SYNE1-204ENST00000367248 DLG4P78352 724 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 MTA1Q13330 715 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 C6orf10Q5SRN2 563 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 MARK2Q7KZI7 788 aaKnown RBP11.94□□□□□ -0.5
SYNE1-204ENST00000367248 TAGAPQ8N103 731 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 ZNF614Q8N883 585 aa11.94□□□□□ -0.5
SYNE1-204ENST00000367248 TMA16Q96EY4 203 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms