RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RMND5BQ96G75 393 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 EGFL8Q99944 293 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 KATNAL1Q9BW62 490 aa12.16□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF263O14978 683 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 HMOX2P30519 316 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 KCNJ2P63252 427 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 MRNIPQ6NTE8 343 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZNF229Q9UJW7 825 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 LRFN2Q9ULH4 789 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 COMMD3-BMI1R4GMX3 469 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 TCEA3O75764 348 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 NOL4O94818 638 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ITGB3P05106 788 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 CRABP2P29373 138 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 MSLNQ13421 630 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ADCK1Q86TW2 530 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PSMD10O75832 226 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ZCCHC18P0CG32 403 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ADRA1DP25100 572 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 RMDN1Q96DB5 314 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ASB2Q96Q27 587 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 TMEM39BQ9GZU3 492 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 C6orf203Q9P0P8 240 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 RECQLP46063 649 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PLOD1Q02809 727 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 OTUB1Q96FW1 271 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 DDHD2O94830 711 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 HOXC6P09630 235 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 BACE1P56817 501 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PGM5Q15124 567 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 N4BP2L1Q5TBK1 243 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ARHGEF19Q8IW93 802 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 GCNAQ96QF7 691 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 POP1Q99575 1024 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PLA2G6O60733 806 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PAX7P23759 505 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 SCN3BQ9NY72 215 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 MEIS2O14770 477 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 CBX6O95503 412 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 NCALDP61601 193 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 CSTF3Q12996 717 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 EFCAB12Q6NXP0 572 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 ARHGAP22Q7Z5H3 698 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 TMEM237Q96Q45 408 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 RUBCNLQ9H714 662 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 PCDHGB4Q9UN71 923 aa12.15□□□□□ -0.46
CDC42BPA-202ENST00000366764 DAB1O75553 588 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.473e-16■■■■■ 75.2
CDC42BPA-202ENST00000366764 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 NAIF1Q69YI7 327 aaPredicted RBP12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 PDPK2PQ6A1A2 396 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 UGT3A1Q6NUS8 523 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 DENND5BQ6ZUT9 1274 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 LNX1Q8TBB1 728 aaPredicted RBP12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 TEKT2Q9UIF3 430 aa12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 COL14A1Q05707 1796 aaKnown RBP12.15□□□□□ -0.47
CDC42BPA-202ENST00000366764 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 CASP5P51878 434 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 TRIM16LQ309B1 348 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 CNBD2Q96M20 576 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 CAMTA1Q9Y6Y1 1673 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 SNX17Q15036 470 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 TRIM69Q86WT6 500 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 PIN4Q9Y237 131 aaKnown RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 C15orf38-AP3S2A0A0A6YYH1 394 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 HEATR9A2RTY3 570 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ARPINQ7Z6K5 226 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 RXFP2Q8WXD0 754 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 DACT3Q96B18 629 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 AP3M1Q9Y2T2 418 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 SERPINA6P08185 405 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ME2P23368 584 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ATP4AP20648 1035 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 RAD51Q06609 339 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 ZNF142P52746 1687 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 A0A087WXM4 84 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 TMEM114B3SHH9 223 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 KBTBD13C9JR72 458 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 EML1O00423 815 aa12.14□□□□□ -0.47
CDC42BPA-202ENST00000366764 CYP2F1P24903 491 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms