RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PDE4CQ08493 712 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 C10orf120Q5SQS8 335 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TADA2BQ86TJ2 420 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TERB1Q8NA31 727 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TXNDC5Q8NBS9 432 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TSTD1Q8NFU3 115 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CDK5RAP1Q96SZ6 601 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ZSWIM1Q9BR11 485 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ARRDC1-AS1Q9H2J1 176 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TSPAN16Q9UKR8 245 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KIAA1257Q9ULG3 409 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 RALGAPA1Q6GYQ0 2036 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MED19A0JLT2 244 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 RNF225M0QZC1 329 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 O00370 1275 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DCLK1O15075 740 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 GDF9O60383 454 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 FOXD2O60548 495 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 GABBR2O75899 941 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KLF8O95600 359 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ZBED1O96006 694 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ZNF806P0C7X5 589 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 RALAP11233 206 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 VDRP11473 427 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TYRP14679 529 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TKTL1P51854 596 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BCAT1P54687 386 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 YWHAEP62258 255 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 GOLGA8FQ08AF8 430 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 GOLGA8DPQ0D2H9 430 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ANO4Q32M45 955 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PREPLQ4J6C6 727 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SGO2Q562F6 1265 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TRIM59Q8IWR1 403 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SCML4Q8N228 414 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TFAP2BQ92481 460 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 RTKNQ9BST9 563 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 LSM7Q9UK45 103 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PCDHGA5Q9Y5G8 931 aa14.36□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TBC1D3BA6NDS4 549 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NEDD8-MDP1E9PL57 170 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SLC30A4O14863 429 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PAEPP09466 180 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 YWHAGP61981 247 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 COG7P83436 770 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 LRMPQ12912 555 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 GOLGA7BQ2TAP0 167 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KLHL10Q6JEL2 608 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 LCLAT1Q6UWP7 414 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MIB1Q86YT6 1006 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 FAM217AQ8IXS0 508 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NETO1Q8TDF5 533 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KAT5Q92993 513 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MED15Q96RN5 788 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BBS2Q9BXC9 721 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TPSD1Q9BZJ3 242 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ULBP1Q9BZM6 244 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ZDHHC4Q9NPG8 344 aa14.35□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SDK1Q7Z5N4 2213 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NCOR2Q9Y618 2525 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BICDL2A1A5D9 508 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 BIN1O00499 593 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SLC8A3P57103 927 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 EFEMP1Q12805 493 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KCNH2Q12809 1159 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SF3A2Q15428 464 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CCDC40Q4G0X9 1142 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 USP39Q53GS9 565 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 EOGTQ5NDL2 527 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 FYB2Q5VWT5 728 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PMS2CLQ68D20 193 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TPGS1Q6ZTW0 290 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SLC35F5Q8WV83 523 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NDRG1Q92597 394 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NT5C1BQ96P26 610 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 RXFP3Q9NSD7 469 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KIAA1468Q9P260 1216 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CDV3Q9UKY7 258 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CNTN6Q9UQ52 1028 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CTNND2Q9UQB3 1225 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms