RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 GPR18Q14330 331 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MFSD13AQ14CX5 517 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FSCN1Q16658 493 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CYP1B1Q16678 543 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 SMTNL2Q2TAL5 461 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CFAP100Q494V2 611 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TDRD12Q587J7 1177 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 DALRD3Q5D0E6 543 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CT83Q5H943 113 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 DMKNQ6E0U4 476 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ISM2Q6H9L7 571 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FAM166AQ6J272 317 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 RGS7BPQ6MZT1 257 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF774Q6NX45 483 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 GADL1Q6ZQY3 521 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 PTCHD4Q6ZW05 846 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MARK2Q7KZI7 788 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF771Q7L3S4 317 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CAND1Q86VP6 1230 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FJX1Q86VR8 437 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 METTL16Q86W50 562 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 UEVLDQ8IX04 471 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 C11orf53Q8IXP5 236 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CADM3Q8N126 398 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC34A3Q8N130 599 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CLIP4Q8N3C7 705 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZGPATQ8N5A5 531 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 Q8N7P7 452 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MAB21L3Q8N8X9 362 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 DCBLD1Q8N8Z6 715 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZSWIM2Q8NEG5 633 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ENGASEQ8NFI3 743 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 OR14A16Q8NHC5 309 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMEM174Q8WUU8 243 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CHTF18Q8WVB6 975 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMED6Q8WW62 240 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 PIGKQ92643 395 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 USP13Q92995 863 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CD101Q93033 1021 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 EAF2Q96CJ1 260 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MSI2Q96DH6 328 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMX3Q96JJ7 454 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ADGRG7Q96K78 797 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 SNX27Q96L92 541 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MOGAT1Q96PD6 335 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FCRL5Q96RD9 977 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRR25Q96S07 402 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FIZ1Q96SL8 496 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 FEZ1Q99689 392 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 C7orf25Q9BPX7 421 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TUBA1CQ9BQE3 449 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 WDR83Q9BRX9 315 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 PTDSS2Q9BVG9 487 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 NUAK2Q9H093 628 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ISCUQ9H1K1 167 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 MRPL46Q9H2W6 279 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ACBD3Q9H3P7 528 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 CATSPERBQ9H7T0 1116 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 IFT122Q9HBG6 1241 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TCF7L1Q9HCS4 588 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 TDP1Q9NUW8 608 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 THG1LQ9NWX6 298 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZIM2Q9NZV7 527 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 DLGAP2Q9P1A6 1054 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 IPO11Q9UI26 975 aaKnown RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC45A2Q9UMX9 530 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ADAM18Q9Y3Q7 739 aa0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 SIRT4Q9Y6E7 314 aaPredicted RBP0.34□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF318Q5VUA4 2279 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 A0A1B0GVT2 93 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC22A23A1A5C7 686 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 NDUFAF8A1L188 74 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 LCHNA4D1U4 455 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 IFNL4K9M1U5 179 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 F2RL2O00254 374 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PLD2O14939 933 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CLGNO14967 610 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 RGS14O43566 566 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 KCNJ13O60928 360 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 F2P00734 622 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CD48P09326 243 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SBK3P0C264 359 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CHRNB1P11230 501 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 GKP32189 559 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CCR10P46092 362 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 RASSF2P50749 326 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC5A3P53794 718 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PSMC1P62191 440 aaKnown RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 IRX1P78414 480 aaPredicted RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 CFHR3Q02985 330 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 TCF15Q12870 199 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 HDAC1Q13547 482 aaPredicted RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PMS2P11Q13670 270 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 RAB39AQ14964 217 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 KPNB1Q14974 876 aaKnown RBP0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 SEPT2Q15019 361 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 MLC1Q15049 377 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 MUM1Q2TAK8 710 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 FLYWCH1Q4VC44 716 aa0.33□□□□□ -2.36
RNU6-54P-201ENST00000365563 PIK3CD-AS1Q5SR53 167 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms