RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 IRX1P78414 480 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 PPATQ06203 517 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 BMPR2Q13873 1038 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TRIP10Q15642 601 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 FAM163AQ96GL9 167 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 MYL4P12829 197 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 DLG4P78352 724 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TFAP2DQ7Z6R9 452 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 MTMR9Q96QG7 549 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 DCLK3Q9C098 648 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 SEMA4AQ9H3S1 761 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 O00370 1275 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 LZTS3O60299 673 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TSPAN3O60637 253 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 SLURP2P0DP57 97 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 PTAR1Q7Z6K3 402 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 HORMAD1Q86X24 394 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 CALCAP01258 141 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 UBTFL6P0CB48 400 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 PSEN2P49810 448 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 CCDC85BQ15834 202 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TTLL9Q3SXZ7 439 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 SLC30A9Q6PML9 568 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 NLRP9Q7RTR0 991 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 HERC6Q8IVU3 1022 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 SLC35C1Q96A29 364 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TLR8Q9NR97 1041 aaKnown RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TBC1D4O60343 1298 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 MRPS35P82673 323 aaKnown RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 HIST2H2ACQ16777 129 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 HIST2H2AA3Q6FI13 130 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 ZNF513Q8N8E2 541 aaPredicted RBP21.71■■□□□ 1.07
SMURF1-201ENST00000361125 TUBGCP3Q96CW5 907 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 CAPN10Q9HC96 672 aa21.71■■□□□ 1.07
SMURF1-201ENST00000361125 VPS26AO75436 327 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 KRT16P08779 473 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 COPAP53621 1224 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 DGKZQ13574 1117 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 C11orf74Q86VG3 221 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 PACS2Q86VP3 889 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ACTL9Q8TC94 416 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 USP13Q92995 863 aaPredicted RBP21.7■■□□□ 1.06
SMURF1-201ENST00000361125 XPNPEP3Q9NQH7 507 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 EPB42P16452 691 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 TPH1P17752 444 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ARMC6Q6NXE6 501 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 EFL1Q7Z2Z2 1120 aaKnown RBP21.7■■□□□ 1.06
SMURF1-201ENST00000361125 GLIS3Q8NEA6 775 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ABHD8Q96I13 439 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ZNF556Q9HAH1 456 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 UBOX5O94941 541 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 CCNJLQ8IV13 435 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 HES6Q96HZ4 224 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 PNMA8BQ9ULN7 279 aaPredicted RBP21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ACKR2O00590 384 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 RIPK2O43353 540 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 STRNO43815 780 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 TRIM16O95361 564 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 PLOD1Q02809 727 aaPredicted RBP21.7■■□□□ 1.06
SMURF1-201ENST00000361125 NBPF20Q3BBV1 942 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 TTMPQ5BVD1 217 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 VPS50Q96JG6 964 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ZFYVE19Q96K21 471 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 SNCAIPQ9Y6H5 919 aa21.7■■□□□ 1.06
SMURF1-201ENST00000361125 ATP6V1G2O95670 118 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 PYGMP11217 842 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 COPS5Q92905 334 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 DLGAP2Q9P1A6 1054 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 SIK3Q9Y2K2 1263 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 hCG_2014768A0A024R1R8 64 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 PDE2AO00408 941 aaPredicted RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 TIMM44O43615 452 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 SCNN1BP51168 640 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 RHBDL3P58872 404 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 HSPA1AP0DMV8 641 aaKnown RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 HSPA1BP0DMV9 641 aaKnown RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 FAM171A1Q5VUB5 890 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 CCDC60Q8IWA6 550 aaPredicted RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 SLC2A14Q8TDB8 520 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 SRPK1Q96SB4 655 aaKnown RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 MANSC4A6NHS7 340 aaPredicted RBP21.69■■□□□ 1.06
SMURF1-201ENST00000361125 PIK3CDO00329 1044 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 CYP3A4P08684 503 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 AKR1A1P14550 325 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 SKOR1P84550 965 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 ABHD16BQ9H3Z7 469 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 VANGL2Q9ULK5 521 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 WASHC5Q12768 1159 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 ZBTB17Q13105 803 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 CSHL1Q14406 222 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 TRIM48Q8IWZ4 208 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 CERS5Q8N5B7 392 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 PCDHB5Q9Y5E4 795 aa21.69■■□□□ 1.06
SMURF1-201ENST00000361125 DDX3XO00571 662 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMURF1-201ENST00000361125 LGALS2P05162 132 aa21.68■■□□□ 1.06
SMURF1-201ENST00000361125 FSCN1Q16658 493 aaKnown RBP21.68■■□□□ 1.06
SMURF1-201ENST00000361125 MAP4K3Q8IVH8 894 aa21.68■■□□□ 1.06
SMURF1-201ENST00000361125 CKBP12277 381 aa21.68■■□□□ 1.06
SMURF1-201ENST00000361125 RAP1GDS1P52306 607 aa21.68■■□□□ 1.06
SMURF1-201ENST00000361125 POU6F1Q14863 301 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms