RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CNTFP26441 200 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 IL31Q6EBC2 164 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 SLC27A1Q6PCB7 646 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 CHSY1Q86X52 802 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 KIAA0319LQ8IZA0 1049 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 ARHGAP18Q8N392 663 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 NRBF2Q96F24 287 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 ACTL7BQ9Y614 415 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 GRK2P25098 689 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 MGAT1P26572 445 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 FLOT2Q14254 428 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 FAM83EQ2M2I3 478 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.85■□□□□ 0.293e-6■■■■■ 58.2
SCAF1-201ENST00000360565 CATSPER1Q8NEC5 780 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 DNAJB3Q8WWF6 145 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 ASIC4Q96FT7 647 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 WRAP73Q9P2S5 460 aaPredicted RBP16.85■□□□□ 0.29
SCAF1-201ENST00000360565 IRF6O14896 467 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 HADHAP40939 763 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 HUNKP57058 714 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ABHD15Q6UXT9 468 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 SETD3Q86TU7 594 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 DAW1Q8N136 415 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 CELF6Q96J87 481 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 WARS2Q9UGM6 360 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TAGLN3Q9UI15 199 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TMEM191CA6NGB0 347 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TTC36A6NLP5 189 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 USP12O75317 370 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 APOA4P06727 396 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ACADSP16219 412 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TPH1P17752 444 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ZNF157P51786 506 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TNFSF13BQ9Y275 285 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 LGALS2P05162 132 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ADCYAP1R1P41586 468 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 TMED1Q13445 227 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ARHGEF6Q15052 776 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 LRRC23Q53EV4 343 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 GJC2Q5T442 439 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 MIB1Q86YT6 1006 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 NUP93Q8N1F7 819 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 VANGL2Q9ULK5 521 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 RUVBL2Q9Y230 463 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 HES2Q9Y543 173 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 DUOX1Q9NRD9 1551 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 RNF103O00237 685 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 THP07101 528 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ADORA2AP29274 412 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ANGPTL8Q6UXH0 198 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 SHCBP1Q8NEM2 672 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 HASPINQ8TF76 798 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 IL1RL2Q9HB29 575 aa16.84■□□□□ 0.29
SCAF1-201ENST00000360565 AFF4Q9UHB7 1163 aaKnown RBP16.84■□□□□ 0.29
SCAF1-201ENST00000360565 AKAP10O43572 662 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 ITGAVP06756 1048 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 RECQLP46063 649 aaPredicted RBP16.83■□□□□ 0.29
SCAF1-201ENST00000360565 ZNF143P52747 638 aaPredicted RBP16.83■□□□□ 0.29
SCAF1-201ENST00000360565 RBBP7Q16576 425 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 C6orf10Q5SRN2 563 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 ZBTB41Q5SVQ8 909 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 JOSD2Q8TAC2 188 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 OXNAD1Q96HP4 312 aaPredicted RBP16.83■□□□□ 0.29
SCAF1-201ENST00000360565 CYP4F12Q9HCS2 524 aa16.83■□□□□ 0.29
SCAF1-201ENST00000360565 SEC24DO94855 1032 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 SUPT7LO94864 414 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 CST3P01034 146 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ABHD2P08910 425 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 GP5P40197 560 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 YY1AP1Q9H869 796 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 DDX43Q9NXZ2 648 aaKnown RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 LRRC37A3O60309 1634 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ARHGAP10A1A4S6 786 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ZCCHC18P0CG32 403 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ODC1P11926 461 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 CCDC130P13994 396 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 PCYOX1LQ8NBM8 494 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 PPP1R13LQ8WUF5 828 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 LRRN4Q8WUT4 740 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 UNKQ9C0B0 810 aaKnown RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ARHGAP28Q9P2N2 729 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 ACOT9Q9Y305 439 aa16.83■□□□□ 0.28
SCAF1-201ENST00000360565 AAR2Q9Y312 384 aaKnown RBP16.83■□□□□ 0.28
SCAF1-201ENST00000360565 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ZBBXA8MT70 800 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 RECQL4O94761 1208 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 STMN1P16949 149 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms