RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ASB2Q96Q27 587 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 TUBE1Q9UJT0 475 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 TGFBR2P37173 567 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 AVENQ9NQS1 362 aaPredicted RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 METTL5Q9NRN9 209 aaKnown RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 M0QYT0 321 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 AMHP03971 560 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 MACC1Q6ZN28 852 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 MAGEB18Q96M61 343 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 ERGIC2Q96RQ1 377 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 ARHGEF3Q9NR81 526 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 TMEM253P0C7T8 217 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 MYBPC2Q14324 1141 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 UBE2E3Q969T4 207 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SEC16BQ96JE7 1060 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 STX11O75558 287 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 GZMAP12544 262 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KYNUQ16719 465 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 PEG10Q86TG7 708 aaKnown RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 CDK20Q8IZL9 346 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ARHGAP28Q9P2N2 729 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CRYL1Q9Y2S2 319 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CENPXA8MT69 81 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 OPLAHO14841 1288 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ANXA6P08133 673 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CYP2A6P11509 494 aaPredicted RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 RCVRNP35243 200 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 COX10Q12887 443 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 PRR5LQ6MZQ0 368 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CCDC81Q6ZN84 652 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KRT6AP02538 564 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KRT6BP04259 564 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CYP11B1P15538 503 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CYP2B6P20813 491 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KRT6CP48668 564 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SHC4Q6S5L8 630 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 WDR49Q8IV35 697 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SIRT2Q8IXJ6 389 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 BSNDQ8WZ55 320 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 TRIM63Q969Q1 353 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 BDH2Q9BUT1 245 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 RACGAP1Q9H0H5 632 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 OSGEPL1Q9H4B0 414 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 PSME2Q9UL46 239 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 RPS6KL1Q9Y6S9 549 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KPNA5O15131 536 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 RGS5O15539 181 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 HS6ST1O60243 411 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ITGB3P05106 788 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 HUNKP57058 714 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 MCL1Q07820 350 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SETD9Q8NE22 299 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 DNERQ8NFT8 737 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 AGPAT3Q9NRZ7 376 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 VTI1BQ9UEU0 232 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CYB561D2O14569 222 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 TEX33O43247 280 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 MYL4P12829 197 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 NUDT2P50583 147 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 GJC2Q5T442 439 aaPredicted RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 RETSATQ6NUM9 610 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 PROX1Q92786 737 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 PANX3Q96QZ0 392 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 POLR1AO95602 1720 aaPredicted RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 DLGAP3O95886 979 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 GALNTL6Q49A17 601 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 DENND5BQ6ZUT9 1274 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ZNF513Q8N8E2 541 aaPredicted RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 DAGLBQ8NCG7 672 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ZNF473Q8WTR7 871 aaKnown RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 USP7Q93009 1102 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 WDR24Q96S15 920 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 VPS28Q9UK41 221 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 CYP11B2P19099 503 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 GMPSP49915 693 aaPredicted RBP9.95□□□□□ -0.82
CUX1-203ENST00000360264 SVOPQ8N4V2 548 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 KYQ8NBH2 561 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 E7ENQ6 273 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 MSH3P20585 1137 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 SMARCD1Q96GM5 515 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 NDUFA13Q9P0J0 144 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 BTKQ06187 659 aa9.95□□□□□ -0.82
CUX1-203ENST00000360264 ITGB6P18564 788 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 LSP1P33241 339 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 HMG20AQ9NP66 347 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 B2RBV5 119 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 IL6P05231 212 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 CCDC130P13994 396 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 PAICSP22234 425 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 DNAJB2P25686 324 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 RAD23AP54725 363 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 SNX8Q9Y5X2 465 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 AXLP30530 894 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 GPR15P49685 360 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 MROH9Q5TGP6 573 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms