RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 SLITRK1Q96PX8 696 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 TLR8Q9NR97 1041 aaKnown RBP25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 MYO7AQ13402 2215 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 DENND4CQ5VZ89 1909 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 ZRANB2O95218 330 aaKnown RBP eCLIP25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 GJC1P36383 396 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 PAFAH1B1P43034 410 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 EPHB3P54753 998 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 EIF4EBP2Q13542 120 aaPredicted RBP25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 BOLA3Q53S33 107 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 SEL1L2Q5TEA6 688 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 CCDC181Q5TID7 509 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 MSANTD2Q6P1R3 559 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 RCOR2Q8IZ40 523 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 KREMEN2Q8NCW0 462 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 SLC7A14Q8TBB6 771 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 LMAN2LQ9H0V9 348 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 SMOC2Q9H3U7 446 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 ZWILCHQ9H900 591 aa25.93■■□□□ 1.74
SHARPIN-201ENST00000359551 PGRMC1O00264 195 aaKnown RBP25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 MDM4O15151 490 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 SLU7O95391 586 aaKnown RBP25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 F9P00740 461 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 SPATA31D3P0C874 917 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 RARAP10276 462 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 ATXN1P54253 815 aaKnown RBP25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 DEUP1Q05D60 604 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 SNX30Q5VWJ9 437 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 AADACL2Q6P093 401 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 SPATA31D4Q6ZUB0 917 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 RTL10Q7L3V2 364 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 PDZD8Q8NEN9 1154 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 PSMG2Q969U7 264 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 RBM41Q96IZ5 413 aaKnown RBP25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 PRO3102Q9H379 93 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 SLC28A3Q9HAS3 691 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 PIGVQ9NUD9 493 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 CHD7Q9P2D1 2997 aa25.92■■□□□ 1.74
SHARPIN-201ENST00000359551 PDE4DIPQ5VU43 2346 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 ITIH3Q06033 890 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 CLUL1Q15846 466 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 SMTNL2Q2TAL5 461 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 SCYL2Q6P3W7 929 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 TAC4Q86UU9 113 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 ZNF276Q8N554 614 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 MNS1Q8NEH6 495 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 WDR6Q9NNW5 1121 aaKnown RBP25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 SMARCAL1Q9NZC9 954 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 MAGED2Q9UNF1 606 aaPredicted RBP25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 ASB3Q9Y575 518 aa25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 TNRC18O15417 2968 aaPredicted RBP25.91■■□□□ 1.74
SHARPIN-201ENST00000359551 KRT1P04264 644 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 COPS2P61201 443 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 KCNT1Q5JUK3 1230 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 DNAJB7Q7Z6W7 309 aaPredicted RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 RAPGEF5Q92565 580 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 SNRNP25Q9BV90 132 aaKnown RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 CERS4Q9HA82 394 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 TMEM51Q9NW97 253 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 C3orf70A6NLC5 250 aaPredicted RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 CLASP2O75122 1294 aaKnown RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 CSPG5O95196 566 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 C8AP07357 584 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 PTPN7P35236 360 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 ARSEP51690 589 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 ITIH5Q86UX2 942 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 PSTKQ8IV42 348 aaKnown RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 ADAM32Q8TC27 787 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 RNF139Q8WU17 664 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 ACSF2Q96CM8 615 aaPredicted RBP25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 RPGRIP1Q96KN7 1286 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 FAM204AQ9H8W3 233 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 KLHL11Q9NVR0 708 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 DDIT4Q9NX09 232 aa25.9■■□□□ 1.74
SHARPIN-201ENST00000359551 RANBP2P49792 3224 aaKnown RBP25.89■■□□□ 1.74
SHARPIN-201ENST00000359551 CTAGE15A4D2H0 777 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 IRAK2O43187 625 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 FGGP02679 453 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 CTAGE8P0CG41 777 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 RALAP11233 206 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 CXCR3P49682 368 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 SMAD3P84022 425 aaKnown RBP25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 NME3Q13232 169 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 TAZQ16635 292 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 ERMARDQ5T6L9 678 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 CTAGE6Q86UF2 777 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 FAM131BQ86XD5 332 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 SLC13A5Q86YT5 568 aaPredicted RBP25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 CTAGE4Q8IX94 777 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 FAM71BQ8TC56 605 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 SLC22A17Q8WUG5 538 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 ARNTL2Q8WYA1 636 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 CASP10Q92851 521 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 NTAN1Q96AB6 310 aa25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 NAP1L3Q99457 506 aaPredicted RBP25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 OLA1Q9NTK5 396 aaKnown RBP25.89■■□□□ 1.73
SHARPIN-201ENST00000359551 RARGP13631 454 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 KDELR1P24390 212 aa25.88■■□□□ 1.73
SHARPIN-201ENST00000359551 GBP1P32455 592 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms