RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 IL1R2P27930 398 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 CTNNB1P35222 781 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 PTPN7P35236 360 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 BMPR1AP36894 532 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 SLC5A3P53794 718 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 DSG1Q02413 1049 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 SLC25A52Q3SY17 297 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 DCAF6Q58WW2 860 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 TXNRD3NBQ6F5E7 133 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 PM20D1Q6GTS8 502 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 SLC8B1Q6J4K2 584 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 ADAT2Q7Z6V5 191 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 KLHL7Q8IXQ5 586 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 VPS52Q8N1B4 723 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 TSC1Q92574 1164 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 NDRG1Q92597 394 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 RUBCNQ92622 972 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 CENPIQ92674 756 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 PEBP4Q96S96 227 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 KRT12Q99456 494 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 NPY6RQ99463 290 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 OSBPL8Q9BZF1 889 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 FBXO44Q9H4M3 255 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 LZTS1Q9Y250 596 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 BRWD1Q9NSI6 2320 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 ZDBF2Q9HCK1 2354 aa14.44□□□□□ -0.1
PDLIM5-203ENST00000359265 LCHNA4D1U4 455 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 LINC01553A4QN01 128 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 TNFRSF10BO14763 440 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RB1P06400 928 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RARAP10276 462 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 HAPLN1P10915 354 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RALAP11233 206 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 MCM3P25205 808 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 HDAC4P56524 1084 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RPL10AP62906 217 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 ROR1Q01973 937 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 SMTNL2Q2TAL5 461 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 MGAT5BQ3V5L5 792 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 BOLA3Q53S33 107 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 SH3PXD2AQ5TCZ1 1133 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 SCYL2Q6P3W7 929 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RSPO2Q6UXX9 243 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RNF19BQ6ZMZ0 732 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 HFE2Q6ZVN8 426 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 BEND5Q7L4P6 421 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 NUP93Q8N1F7 819 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 ATAD1Q8NBU5 361 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 HSPH1Q92598 858 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 RUNDC3BQ96NL0 473 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 SEPT5Q99719 369 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 DDX47Q9H0S4 455 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 MRPL17Q9NRX2 175 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 COMMD8Q9NX08 183 aa14.43□□□□□ -0.1
PDLIM5-203ENST00000359265 WDR27A2RRH5 827 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 C2CD2LO14523 706 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 MDM4O15151 490 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 TJP3O95049 919 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 RTN3O95197 1032 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 NCAM1P13591 858 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 KDELR1P24390 212 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CHRNA3P32297 505 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 OR1D2P34982 312 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 RDXP35241 583 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 UBE3AQ05086 875 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 DEUP1Q05D60 604 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 IFRD2Q12894 506 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 PDK2Q15119 407 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CYP1B1Q16678 543 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 TFDP3Q5H9I0 405 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 MFSD7Q6UXD7 560 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CYP4V2Q6ZWL3 525 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 BHLHA9Q7RTU4 235 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 ARHGAP18Q8N392 663 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 TTC9BQ8N6N2 239 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 C12orf50Q8NA57 414 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 KLHL23Q8NBE8 558 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 SPDYE1Q8NFV5 336 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CMASQ8NFW8 434 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CCDC26Q8TAB7 109 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 RAPGEF5Q92565 580 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 NT5C3BQ969T7 300 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 CEP295NLQ96MC4 621 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 LRRC1Q9BTT6 524 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 SNRNP25Q9BV90 132 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 ANKZF1Q9H8Y5 726 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 ARGLU1Q9NWB6 273 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 AFF4Q9UHB7 1163 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 SCML2Q9UQR0 700 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 EFR3BQ9Y2G0 817 aa14.42□□□□□ -0.1
PDLIM5-203ENST00000359265 hCG_1818297A0A087WSY0 165 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 TCRBV7S2A1N4TA0A589 114 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms