RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 FNBP1LQ5T0N5 605 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 WSCD1Q658N2 575 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 C6orf89Q6UWU4 347 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 ARHGEF18Q6ZSZ5 1173 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 SEC16BQ96JE7 1060 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 DHX35Q9H5Z1 703 aaKnown RBP15.48■□□□□ 0.07
GABPB1-202ENST00000359031 USP29Q9HBJ7 922 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 NKIRAS1Q9NYS0 192 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 PSMC3IPQ9P2W1 217 aaPredicted RBP15.48■□□□□ 0.07
GABPB1-202ENST00000359031 TBK1Q9UHD2 729 aa15.48■□□□□ 0.07
GABPB1-202ENST00000359031 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
GABPB1-202ENST00000359031 RASA4BC9J798 803 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 KCNN4O15554 427 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 RASA4O43374 803 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 CHRNA1P02708 482 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 ATP2A2P16615 1042 aaKnown RBP15.47■□□□□ 0.07
GABPB1-202ENST00000359031 MAGEA6P43360 314 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 LHX1P48742 406 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 SULT1E1P49888 294 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 RAB27AP51159 221 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 GPX6P59796 221 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 MRPS5P82675 430 aaKnown RBP15.47■□□□□ 0.07
GABPB1-202ENST00000359031 PPP6R3Q5H9R7 873 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-202ENST00000359031 TRABD2AQ86V40 505 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 ANKMY2Q8IV38 441 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 SRRM1Q8IYB3 904 aaKnown RBP15.47■□□□□ 0.07
GABPB1-202ENST00000359031 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 DPF3Q92784 378 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 WNT8BQ93098 351 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 SENP8Q96LD8 212 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 GAD1Q99259 594 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 KCNK9Q9NPC2 374 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 STAP1Q9ULZ2 295 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 HEY1Q9Y5J3 304 aa15.47■□□□□ 0.07
GABPB1-202ENST00000359031 TCRBV7S3A2A0A539 114 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 POC1B-GALNT4F8VUJ3 575 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 ADAMTS4O75173 837 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 SPAG6O75602 509 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 FBXO21O94952 628 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 PGK1P00558 417 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 CTSHP09668 335 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 FAM200BP0CF97 657 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 CREB1P16220 341 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 MAGEA9P43362 315 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 SLC18A1P54219 525 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 GEMIN4P57678 1058 aaKnown RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 GAD2Q05329 585 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 MSS51Q4VC12 460 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 MDH1BQ5I0G3 518 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 CLEC20AQ6ZU45 233 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 MRPL10Q7Z7H8 261 aaKnown RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 DEFB106AQ8N104 65 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 SIX6OS1Q8N1H7 587 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 OTUD6BQ8N6M0 293 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 FBXO36Q8NEA4 188 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 SGSM3Q96HU1 749 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 QKIQ96PU8 341 aaKnown RBP eCLIP15.46■□□□□ 0.073e-6■■■■□ 21.4
GABPB1-202ENST00000359031 KCTD15Q96SI1 283 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 MED10Q9BTT4 135 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 ADAM33Q9BZ11 813 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 ARHGAP39Q9C0H5 1083 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 KLC2Q9H0B6 622 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 ACSS3Q9H6R3 686 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 LRRC4Q9HBW1 653 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 DDX43Q9NXZ2 648 aaKnown RBP15.46■□□□□ 0.07
GABPB1-202ENST00000359031 GABRQQ9UN88 632 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 CENPFP49454 3210 aa15.46■□□□□ 0.07
GABPB1-202ENST00000359031 FAM47DPA6NHR8 397 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 MEIS3P2A8K0S8 358 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 PRPF4O43172 522 aaKnown RBP eCLIP15.46■□□□□ 0.064e-7■■□□□ 12.4
GABPB1-202ENST00000359031 ATP2C2O75185 946 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 BANF1O75531 89 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 ACAT1P24752 427 aaKnown RBP15.46■□□□□ 0.06
GABPB1-202ENST00000359031 RBL1P28749 1068 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 NOS2P35228 1153 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 IFNAR2P48551 515 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 ITIH4Q14624 930 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 BBS9Q3SYG4 887 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 SLC45A4Q5BKX6 768 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 PAQR9Q6ZVX9 377 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 BNIPLQ7Z465 357 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 LRRC34Q8IZ02 419 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 CCDC185Q8N715 623 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 ANKRD42Q8N9B4 389 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 CCDC197Q8NCU1 140 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 MGARPQ8TDB4 240 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 CKAP2Q8WWK9 683 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 FAM149B1Q96BN6 582 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 CABS1Q96KC9 395 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 CSPG4P5Q96PW8 444 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 SLC2A13Q96QE2 648 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 DHRS4Q9BTZ2 278 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 KRT82Q9NSB4 513 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 MTMR10Q9NXD2 777 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.06
GABPB1-202ENST00000359031 RABGEF1Q9UJ41 708 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms