RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 EMC1Q8N766 993 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 ARL14EPQ8N8R7 260 aaPredicted RBP15.94■□□□□ 0.14
TPM1-206ENST00000358278 ARHGEF26Q96DR7 871 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 SLC2A13Q96QE2 648 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 NUP85Q9BW27 656 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
TPM1-206ENST00000358278 CTTNBP2NLQ9P2B4 639 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 TMEM59LQ9UK28 342 aa15.94■□□□□ 0.14
TPM1-206ENST00000358278 TCRBV5S1A1TA0A578 114 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 CYP1A2P05177 515 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 FYNP06241 537 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 PFKLP17858 780 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 SP100P23497 879 aaPredicted RBP15.93■□□□□ 0.14
TPM1-206ENST00000358278 FLT3P36888 993 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 MATKP42679 507 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 EFEMP1Q12805 493 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 PUS10Q3MIT2 529 aaKnown RBP15.93■□□□□ 0.14
TPM1-206ENST00000358278 BEND5Q7L4P6 421 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 ARCQ7LC44 396 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 CMTM8Q8IZV2 173 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 ZNF276Q8N554 614 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 JOSD2Q8TAC2 188 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.93■□□□□ 0.14
TPM1-206ENST00000358278 KHSRPQ92945 711 aaKnown RBP eCLIP15.93■□□□□ 0.144e-9■□□□□ 9.5
TPM1-206ENST00000358278 CYP2S1Q96SQ9 504 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 SLC46A2Q9BY10 475 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 GDE1Q9NZC3 331 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 RASAL2Q9UJF2 1139 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 DNMT3LQ9UJW3 386 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 CDH7Q9ULB5 785 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 STAP1Q9ULZ2 295 aa15.93■□□□□ 0.14
TPM1-206ENST00000358278 REXO2Q9Y3B8 237 aaKnown RBP15.93■□□□□ 0.14
TPM1-206ENST00000358278 SOBPA7XYQ1 873 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 MDM4O15151 490 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 TBX18O95935 607 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 MBL2P11226 248 aaPredicted RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 PDGFRAP16234 1089 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 SDC4P31431 198 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 NOS2P35228 1153 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 RFC1P35251 1148 aaPredicted RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 VAV2P52735 878 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 RPL7AP62424 266 aaKnown RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 SMAD2Q15796 467 aaKnown RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 AAK1Q2M2I8 961 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 PPP1R15BQ5SWA1 713 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 SYPL2Q5VXT5 272 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 KLHDC10Q6PID8 442 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 OTOP3Q7RTS5 596 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 MIB1Q86YT6 1006 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 ZSCAN18Q8TBC5 510 aaPredicted RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 ZNF564Q8TBZ8 553 aaPredicted RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
TPM1-206ENST00000358278 SLC22A12Q96S37 553 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 MYADMQ96S97 322 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 FAM204AQ9H8W3 233 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 MARCH2Q9P0N8 246 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 UVRAGQ9P2Y5 699 aa15.92■□□□□ 0.14
TPM1-206ENST00000358278 CCDC175P0C221 793 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 DESP17661 470 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 GPD1P21695 349 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 SULT1E1P49888 294 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 MSANTD2Q6P1R3 559 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 RHOT2Q8IXI1 618 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 TTC16Q8NEE8 873 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 ADAM32Q8TC27 787 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 RXFP2Q8WXD0 754 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 RFFLQ8WZ73 363 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 ACSF2Q96CM8 615 aaPredicted RBP15.91■□□□□ 0.14
TPM1-206ENST00000358278 ZSWIM3Q96MP5 696 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 CFAP57Q96MR6 1250 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 RNF38Q9H0F5 515 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 SMOC2Q9H3U7 446 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 RRN3Q9NYV6 651 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 SFMBT1Q9UHJ3 866 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 ANAPC7Q9UJX3 599 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 ADGRG1Q9Y653 693 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 ZFP37Q9Y6Q3 630 aaPredicted RBP15.91■□□□□ 0.14
TPM1-206ENST00000358278 SYNJ2BP-COX16A0A087WUM0 186 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 C2CD4BA6NLJ0 364 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 OLFM2O95897 454 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 TRNP1Q6NT89 227 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 TAC4Q86UU9 113 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 TDRD5Q8NAT2 981 aaKnown RBP15.91■□□□□ 0.14
TPM1-206ENST00000358278 SLC35G2Q8TBE7 412 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 SERPINB11Q96P15 392 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 PHF7Q9BWX1 381 aaPredicted RBP15.91■□□□□ 0.14
TPM1-206ENST00000358278 SMPD4Q9NXE4 827 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 COX16Q9P0S2 106 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 TFR2Q9UP52 801 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 USTQ9Y2C2 406 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 NR2E1Q9Y466 385 aa15.91■□□□□ 0.14
TPM1-206ENST00000358278 M0QYT0 321 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 MSI1O43347 362 aaKnown RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 TRUB2O95900 331 aaKnown RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 SLC7A9P82251 487 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 ATP11AP98196 1134 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 CDO1Q16878 200 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 SLC25A52Q3SY17 297 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 ARID3BQ8IVW6 561 aaPredicted RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 SMARCD2Q92925 531 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms