RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 TSNARE1Q96NA8 513 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 WRNIP1Q96S55 665 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PPP1R16BQ96T49 567 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 TEX13BQ9BXU2 312 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 DDX56Q9NY93 547 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 BCAP29Q9UHQ4 241 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 SOX13Q9UN79 622 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 INPP5FQ9Y2H2 1132 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 CFHP08603 1231 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 OCM2P0CE71 109 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 OCMP0CE72 109 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 UQCRBP14927 111 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 ALOX15P16050 662 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 EEF1DP29692 281 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 VCPP55072 806 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 MRPS22P82650 360 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 ANO4Q32M45 955 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 TDRD10Q5VZ19 366 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 FAM160B1Q5W0V3 765 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 CLVS1Q8IUQ0 354 aaPredicted RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 PPIL6Q8IXY8 311 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 NDUFAF2Q8N183 169 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 RNF169Q8NCN4 708 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 PDZD8Q8NEN9 1154 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 VCPIP1Q96JH7 1222 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 MPHOSPH6Q99547 160 aaKnown RBP10.34□□□□□ -0.75
RNF40-202ENST00000357890 YIPF2Q9BWQ6 316 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 RAB6BQ9NRW1 208 aa10.34□□□□□ -0.75
RNF40-202ENST00000357890 RBM47A0AV96 593 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 GMNNO75496 209 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 APRTP07741 180 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 SPATA31D3P0C874 917 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 CCNG1P51959 295 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 CDH6P55285 790 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 HPCAP84074 193 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 SIX1Q15475 284 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 ZACNQ401N2 412 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 OR6B2Q6IFH4 312 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 SPATA31D4Q6ZUB0 917 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 TMA16Q96EY4 203 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 MTMR12Q9C0I1 747 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 COPS7BQ9H9Q2 264 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 KRT82Q9NSB4 513 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 RRN3Q9NYV6 651 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 COL2A1P02458 1487 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 DPEP1P16444 411 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 SOX11P35716 441 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 NUDT2P50583 147 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 NOMO3P69849 1222 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 FLOT2Q14254 428 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 ZNF280CQ8ND82 737 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 GFM2Q969S9 779 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 SERPINI1Q99574 410 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 DRC3Q9H069 523 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 ACTL7BQ9Y614 415 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 PRPSAP2O60256 369 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 GRAP2O75791 330 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 ZBED1O96006 694 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 TFPTP0C1Z6 253 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 UNGP13051 313 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 AP3M2P53677 418 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 LSAMPQ13449 338 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 PLEKHA7Q6IQ23 1121 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 ACAD11Q709F0 780 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 CCDC60Q8IWA6 550 aaPredicted RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 HEXIM2Q96MH2 286 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 SLITRK1Q96PX8 696 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 WARS2Q9UGM6 360 aaKnown RBP10.33□□□□□ -0.76
RNF40-202ENST00000357890 STRIP2Q9ULQ0 834 aa10.33□□□□□ -0.76
RNF40-202ENST00000357890 HSPA4LO95757 839 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 FAM58BPP0C7Q3 252 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 SUPT20HL2P0C7V6 817 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 CCDC166P0CW27 439 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 FGFR3P22607 806 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 BACE1P56817 501 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 MYL6P60660 151 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 LPIN1Q14693 890 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 SUPT20HL1Q3ZLR7 823 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 SH3D19Q5HYK7 790 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 NET1Q7Z628 596 aaPredicted RBP10.32□□□□□ -0.76
RNF40-202ENST00000357890 AMIGO2Q86SJ2 522 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 DEPDC1BQ8WUY9 529 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 C7orf43Q8WVR3 580 aa10.32□□□□□ -0.76
RNF40-202ENST00000357890 SLCO2A1Q92959 643 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms