RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ULK2Q8IYT8 1036 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 ARHGAP18Q8N392 663 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 AFG1LQ8WV93 481 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 UCMAQ8WVF2 138 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
RTN4-204ENST00000357732 ENO1P06733 434 aaKnown RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 CRABP2P29373 138 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 KRT81Q14533 505 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 NPNTQ6UXI9 565 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 DTX3LQ8TDB6 740 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 XAB2Q9HCS7 855 aaKnown RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 NDE1Q9NXR1 346 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 M0QYV0 167 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 RPS12P25398 132 aaKnown RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 MTM1Q13496 603 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 STILQ15468 1287 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 HSF5Q4G112 596 aaPredicted RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 ATF7IP2Q5U623 682 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 CWF19L1Q69YN2 538 aaKnown RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 WDR75Q8IWA0 830 aaKnown RBP18.35■□□□□ 0.53
RTN4-204ENST00000357732 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 ZNF670Q9BS34 389 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 FZD8Q9H461 694 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 SOX13Q9UN79 622 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
RTN4-204ENST00000357732 AVILO75366 819 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 MYL4P12829 197 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 AMPD1P23109 780 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 GMPSP49915 693 aaPredicted RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 CACNA2D1P54289 1103 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 AQP5P55064 265 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 BCAR1P56945 870 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 MMRN1Q13201 1228 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 STX3Q13277 289 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 RIPOR1Q6ZS17 1223 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 EBNA1BP2Q99848 306 aaKnown RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 RPF1Q9H9Y2 349 aaKnown RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 IL1RAPL1Q9NZN1 696 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 SIX4Q9UIU6 781 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 SDR42E2A6NKP2 422 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 CXorf49A8MYA2 514 aaPredicted RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 MDM4O15151 490 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 PEX10O60683 326 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 KLHL2O95198 593 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 PDGFRAP16234 1089 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 SARNPP82979 210 aaKnown RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 AP1ARQ63HQ0 302 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 METTL7BQ6UX53 244 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 UNC5AQ6ZN44 842 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 STKLD1Q8NE28 680 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 VCX3BQ9H321 246 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 IFT122Q9HBG6 1241 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 PLAC1Q9HBJ0 212 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 TNFSF13BQ9Y275 285 aa18.34■□□□□ 0.53
RTN4-204ENST00000357732 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.34■□□□□ 0.53
RTN4-204ENST00000357732 EIF4E1BA6NMX2 242 aaKnown RBP18.33■□□□□ 0.53
RTN4-204ENST00000357732 GCATO75600 419 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 ITGBL1O95965 494 aaPredicted RBP18.33■□□□□ 0.53
RTN4-204ENST00000357732 GNAT1P11488 350 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 EDNRBP24530 442 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 RAP1GAPP47736 663 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 XIAPP98170 497 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 NAB1Q13506 487 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 RXFP2Q8WXD0 754 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 PANX3Q96QZ0 392 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 MECRQ9BV79 373 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 SLC7A8Q9UHI5 535 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 C2CD2Q9Y426 696 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 PCDHA11Q9Y5I1 949 aa18.33■□□□□ 0.53
RTN4-204ENST00000357732 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
RTN4-204ENST00000357732 SNUPNO95149 360 aaKnown RBP18.33■□□□□ 0.52
RTN4-204ENST00000357732 APRTP07741 180 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 KRT19P08727 400 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 ZFXP17010 805 aaPredicted RBP18.33■□□□□ 0.52
RTN4-204ENST00000357732 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
RTN4-204ENST00000357732 NDUFAF2Q8N183 169 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 C1orf127Q8N9H9 656 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 ASCC2Q9H1I8 757 aaPredicted RBP18.33■□□□□ 0.52
RTN4-204ENST00000357732 ZDHHC7Q9NXF8 308 aa18.33■□□□□ 0.52
RTN4-204ENST00000357732 IL4RP24394 825 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 RBL1P28749 1068 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 NRLP54845 237 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 RPL26P61254 145 aaKnown RBP18.32■□□□□ 0.52
RTN4-204ENST00000357732 INCA1Q0VD86 236 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 HNRNPDQ14103 355 aaKnown RBP18.32■□□□□ 0.52
RTN4-204ENST00000357732 C1orf146Q5VVC0 180 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 C1orf228Q6PIY5 440 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 LCLAT1Q6UWP7 414 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 PQLC3Q8N755 202 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 PIWIL2Q8TC59 973 aaKnown RBP18.32■□□□□ 0.52
RTN4-204ENST00000357732 JADE3Q92613 823 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 PPP2R3CQ969Q6 453 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 SIGLEC10Q96LC7 697 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 ECSITQ9BQ95 431 aa18.32■□□□□ 0.52
RTN4-204ENST00000357732 NFKBIZQ9BYH8 718 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms