RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CDC25CP30307 473 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 MATKP42679 507 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 ITIH3Q06033 890 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 KIF5AQ12840 1032 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 C15orf59Q2T9L4 293 aaPredicted RBP26.54■■□□□ 1.84
SSBP3-202ENST00000357475 CCDC14Q49A88 953 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 DAB2IPQ5VWQ8 1189 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 TRIM44Q96DX7 344 aaPredicted RBP26.54■■□□□ 1.84
SSBP3-202ENST00000357475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.54■■□□□ 1.842e-6■■■□□ 14.9
SSBP3-202ENST00000357475 UVRAGQ9P2Y5 699 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 SFMBT1Q9UHJ3 866 aa26.54■■□□□ 1.84
SSBP3-202ENST00000357475 MRPS23Q9Y3D9 190 aaKnown RBP26.54■■□□□ 1.84
SSBP3-202ENST00000357475 MACROD2A1Z1Q3 448 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 CAPN9O14815 690 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 OAS1P00973 400 aaKnown RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 GPD1P21695 349 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 PPP3CCP48454 512 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 PSEN1P49768 467 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 CBX2Q14781 532 aaPredicted RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 HECTD3Q5T447 861 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 ARCQ7LC44 396 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 MAB21L3Q8N8X9 362 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 LEMD2Q8NC56 503 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 DQX1Q8TE96 717 aaKnown RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 MRPS31Q92665 395 aaKnown RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 ZSWIM3Q96MP5 696 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 DDX23Q9BUQ8 820 aaKnown RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 WDR6Q9NNW5 1121 aaKnown RBP26.53■■□□□ 1.84
SSBP3-202ENST00000357475 CD207Q9UJ71 328 aa26.53■■□□□ 1.84
SSBP3-202ENST00000357475 CLUHO75153 1309 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 MTA2O94776 668 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 NOS2P35228 1153 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 NOP2P46087 812 aaKnown RBP26.52■■□□□ 1.84
SSBP3-202ENST00000357475 TCEAL1Q15170 157 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 C10orf120Q5SQS8 335 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 GPR158Q5T848 1215 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 CES5AQ6NT32 575 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 TAC4Q86UU9 113 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 RHOT2Q8IXI1 618 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 ARL14EPQ8N8R7 260 aaPredicted RBP26.52■■□□□ 1.84
SSBP3-202ENST00000357475 GCNAQ96QF7 691 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 TBCBQ99426 244 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 NPY6RQ99463 290 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 SLC46A2Q9BY10 475 aa26.52■■□□□ 1.84
SSBP3-202ENST00000357475 HELZP42694 1942 aaKnown RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 DOCK8Q8NF50 2099 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 A0A0A6YYK5 440 aaPredicted RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 GRXCR2A6NFK2 248 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 BTNL10A8MVZ5 291 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 CCP110O43303 1012 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 MSI1O43347 362 aaKnown RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 RALAP11233 206 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 FSHRP23945 695 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 ATXN1P54253 815 aaKnown RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 ATP11AP98196 1134 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 EFEMP1Q12805 493 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 HS1BP3Q53T59 392 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 ATAT1Q5SQI0 421 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 RSRC2Q7L4I2 434 aaKnown RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 BEND5Q7L4P6 421 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 GET4Q7L5D6 327 aaPredicted RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 CCAR2Q8N163 923 aaKnown RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 GOLPH3Q9H4A6 298 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 POMKQ9H5K3 350 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 GUCA1BQ9UMX6 200 aa26.51■■□□□ 1.83
SSBP3-202ENST00000357475 USP15Q9Y4E8 981 aaPredicted RBP26.51■■□□□ 1.83
SSBP3-202ENST00000357475 TMEM110-MUSTN1A8MSY1 372 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 MOCS3O95396 460 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 FGF19O95750 216 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 SULT1E1P49888 294 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 ZNF143P52747 638 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-202ENST00000357475 CDO1Q16878 200 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 KIAA1524Q8TCG1 905 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 RNF139Q8WU17 664 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 NT5C3BQ969T7 300 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 SMG9Q9H0W8 520 aaKnown RBP26.5■■□□□ 1.83
SSBP3-202ENST00000357475 PRDM6Q9NQX0 595 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 RASAL2Q9UJF2 1139 aa26.5■■□□□ 1.83
SSBP3-202ENST00000357475 SYNJ2BP-COX16A0A087WUM0 186 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 DPYSL4O14531 572 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 ZNF197O14709 1029 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 TUBP50607 506 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 MSANTD2Q6P1R3 559 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 ZNF662Q6ZS27 426 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 MIB1Q86YT6 1006 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 ARFGAP1Q8N6T3 406 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 SUSD6Q92537 303 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 COX16Q9P0S2 106 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 OLFM2O95897 454 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 TRUB2O95900 331 aaKnown RBP26.49■■□□□ 1.83
SSBP3-202ENST00000357475 IGLV3-25P01717 112 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 PSMA2P25787 234 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 SDC4P31431 198 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 ZXDBP98169 803 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 MESDQ14696 234 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 SLC25A52Q3SY17 297 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 NPAS3Q8IXF0 933 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 MAFAQ8NHW3 353 aaPredicted RBP26.49■■□□□ 1.83
SSBP3-202ENST00000357475 HLA-CQ95604 372 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 IRX2Q9BZI1 471 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms